Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	E	L	L	S	E	Y	G	L	F	L	A	K	I	V	T	V	V	L	A	I	A	A	I	A	A	I	I	V	N	V	A	Q	R	N	K	R	Q	R	G	E	L	R	V	N	N	L	S	E	Q	Y	K	E	M	K	E	E	L	A	A
Secondary structure
SS confidence
Disorder		?	?																																?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	L	M	D	S	H	Q	Q	K	Q	W	H	K	A	Q	K	K	K	H	K	Q	E	A	K	A	A	K	A	K	A	K	L	G	E	V	A	T	D	S	K	P	R	V	W	V	L	D	F	K	G	S	M	D	A	H	E	V	N	S	L
Secondary structure
SS confidence
Disorder			?	?	?	?									?		?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?		?												?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		R	E	E	I	T	A	V	L	A	A	F	K	P	Q	D	Q	V	V	L	R	L	E	S	P	G	G	M	V	H	G	Y	G	L	A	A	S	Q	L	Q	R	L	R	D	K	N	I	P	L	T	V	T	V	D	K	V	A	A	S	G	G
Secondary structure
SS confidence
Disorder											?																	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		Y	M	M	A	C	V	A	D	K	I	V	S	A	P	F	A	I	V	G	S	I	G	V	V	A	Q	M	P	N	F	N	R	F	L	K	S	K	D	I	D	I	E	L	H	T	A	G	Q	Y	K	R	T	L	T	L	L	G	E	N	T
Secondary structure
SS confidence
Disorder																																																						?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		E	E	G	R	E	K	F	R	E	E	L	N	E	T	H	Q	L	F	K	D	F	V	K	R	M	R	P	S	L	D	I	E	Q	V	A	T	G	E	H	W	Y	G	Q	Q	A	V	E	K	G	L	V	D	E	I	N	T	S	D	E	V
Secondary structure
SS confidence
Disorder																									?		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Sequence		I	L	S	L	M	E	G	R	E	V	V	N	V	R	Y	M	Q	R	K	R	L	I	D	R	F	T	G	S	A	A	E	S	A	D	R	L	L	L	R	W	W	Q	R	G	Q	K	P	L	M
Secondary structure
SS confidence
Disorder																	?	?	?	?	?																							?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3bez chain C Region: 12 - 314 Aligned: 302 Modelled: 303 Confidence: 100.0% Identity: 22% PDB header:hydrolase Chain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals Phyre2 PDB 3p2l chain D Region: 105 - 300 Aligned: 162 Modelled: 166 Confidence: 100.0% Identity: 17% PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: crystal structure of atp-dependent clp protease subunit p from2 francisella tularensis Phyre2 PDB 2deo chain A Region: 99 - 330 Aligned: 182 Modelled: 186 Confidence: 99.9% Identity: 16% PDB header:hydrolase Chain: A: PDB Molecule:441aa long hypothetical nfed protein; PDBTitle: 1510-n membrane protease specific for a stomatin homolog from2 pyrococcus horikoshii Phyre2 PDB 1yg6 chain A domain 1 Region: 105 - 299 Aligned: 161 Modelled: 164 Confidence: 99.9% Identity: 22% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Clp protease, ClpP subunit Phyre2 PDB 3kth chain D Region: 105 - 299 Aligned: 161 Modelled: 165 Confidence: 99.9% Identity: 20% PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form Phyre2 PDB 1tg6 chain G Region: 105 - 294 Aligned: 156 Modelled: 160 Confidence: 99.9% Identity: 16% PDB header:hydrolase Chain: G: PDB Molecule:putative atp-dependent clp protease proteolytic subunit; PDBTitle: crystallography and mutagenesis point to an essential role for the n-2 terminus of human mitochondrial clpp Phyre2 PDB 3q7h chain M Region: 105 - 296 Aligned: 158 Modelled: 162 Confidence: 99.9% Identity: 20% PDB header:hydrolase Chain: M: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of the clpp subunit of the atp-dependent clp protease from2 coxiella burnetii Phyre2 PDB 1tg6 chain A domain 1 Region: 105 - 296 Aligned: 158 Modelled: 162 Confidence: 99.9% Identity: 16% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Clp protease, ClpP subunit Phyre2 PDB 2cby chain G Region: 105 - 296 Aligned: 148 Modelled: 152 Confidence: 99.9% Identity: 22% PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease proteolytic subunit 1; PDBTitle: crystal structure of the atp-dependent clp protease2 proteolytic subunit 1 (clpp1) from mycobacterium3 tuberculosis Phyre2 PDB 2cby chain A domain 1 Region: 105 - 296 Aligned: 148 Modelled: 152 Confidence: 99.9% Identity: 22% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Clp protease, ClpP subunit Phyre2 PDB 1y7o chain A domain 1 Region: 105 - 296 Aligned: 148 Modelled: 148 Confidence: 99.9% Identity: 22% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Clp protease, ClpP subunit Phyre2 PDB 2f6i chain A domain 1 Region: 105 - 296 Aligned: 147 Modelled: 154 Confidence: 99.9% Identity: 17% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Clp protease, ClpP subunit Phyre2 PDB 2f6i chain G Region: 105 - 296 Aligned: 147 Modelled: 157 Confidence: 99.9% Identity: 14% PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease, putative; PDBTitle: crystal structure of the clpp protease catalytic domain from2 plasmodium falciparum Phyre2 PDB 1y7o chain E Region: 105 - 296 Aligned: 148 Modelled: 143 Confidence: 99.9% Identity: 22% PDB header:hydrolase Chain: E: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: the structure of streptococcus pneumoniae a153p clpp Phyre2 PDB 2ej5 chain B Region: 98 - 306 Aligned: 161 Modelled: 161 Confidence: 99.1% Identity: 20% PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase subunit ii; PDBTitle: crystal structure of gk2038 protein (enoyl-coa hydratase subunit ii)2 from geobacillus kaustophilus Phyre2 PDB 3pea chain D Region: 98 - 308 Aligned: 163 Modelled: 163 Confidence: 99.1% Identity: 16% PDB header:isomerase Chain: D: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of enoyl-coa hydratase from bacillus anthracis str.2 'ames ancestor' Phyre2 PDB 2q35 chain A Region: 95 - 347 Aligned: 205 Modelled: 205 Confidence: 99.0% Identity: 17% PDB header:lyase Chain: A: PDB Molecule:curf; PDBTitle: crystal structure of the y82f variant of ech2 decarboxylase domain of2 curf from lyngbya majuscula Phyre2 PDB 3p5m chain B Region: 98 - 306 Aligned: 161 Modelled: 161 Confidence: 99.0% Identity: 20% PDB header:isomerase Chain: B: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium avium Phyre2 PDB 2iex chain A Region: 98 - 306 Aligned: 161 Modelled: 161 Confidence: 99.0% Identity: 17% PDB header:lyase Chain: A: PDB Molecule:dihydroxynapthoic acid synthetase; PDBTitle: crystal structure of dihydroxynapthoic acid synthetase (gk2873) from2 geobacillus kaustophilus hta426 Phyre2 PDB 3fdu chain F Region: 98 - 343 Aligned: 198 Modelled: 198 Confidence: 98.9% Identity: 20% PDB header:isomerase Chain: F: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a putative enoyl-coa hydratase/isomerase from2 acinetobacter baumannii Phyre2 1 c3bezC_ 2 c3p2lD_ 3 c2deoA_ 4 d1yg6a1 5 c3kthD_ 6 c1tg6G_ 7 c3q7hM_ 8 d1tg6a1 9 c2cbyG_ 10 d2cbya1 11 d1y7oa1 12 d2f6ia1 13 c2f6iG_ 14 c1y7oE_ 15 c2ej5B_ 16 c3peaD_ 17 c2q35A_ 18 c3p5mB_ 19 c2iexA_ 20 c3fduF_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3bezC_ 100.0 22 PDB header:hydrolase Chain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals 2 c3p2lD_ 100.0 17 PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: crystal structure of atp-dependent clp protease subunit p from2 francisella tularensis 3 c2deoA_ 99.9 16 PDB header:hydrolase Chain: A: PDB Molecule:441aa long hypothetical nfed protein; PDBTitle: 1510-n membrane protease specific for a stomatin homolog from2 pyrococcus horikoshii 4 d1yg6a1 99.9 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 5 c3kthD_ 99.9 20 PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form 6 c1tg6G_ 99.9 16 PDB header:hydrolase Chain: G: PDB Molecule:putative atp-dependent clp protease proteolytic subunit; PDBTitle: crystallography and mutagenesis point to an essential role for the n-2 terminus of human mitochondrial clpp 7 c3q7hM_ 99.9 20 PDB header:hydrolase Chain: M: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of the clpp subunit of the atp-dependent clp protease from2 coxiella burnetii 8 d1tg6a1 99.9 16 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 9 c2cbyG_ 99.9 22 PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease proteolytic subunit 1; PDBTitle: crystal structure of the atp-dependent clp protease2 proteolytic subunit 1 (clpp1) from mycobacterium3 tuberculosis 10 d2cbya1 99.9 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 11 d1y7oa1 99.9 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 12 d2f6ia1 99.9 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 13 c2f6iG_ 99.9 14 PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease, putative; PDBTitle: crystal structure of the clpp protease catalytic domain from2 plasmodium falciparum 14 c1y7oE_ 99.9 22 PDB header:hydrolase Chain: E: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: the structure of streptococcus pneumoniae a153p clpp 15 c2ej5B_ 99.1 20 PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase subunit ii; PDBTitle: crystal structure of gk2038 protein (enoyl-coa hydratase subunit ii)2 from geobacillus kaustophilus 16 c3peaD_ 99.1 16 PDB header:isomerase Chain: D: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of enoyl-coa hydratase from bacillus anthracis str.2 'ames ancestor' 17 c2q35A_ 99.0 17 PDB header:lyase Chain: A: PDB Molecule:curf; PDBTitle: crystal structure of the y82f variant of ech2 decarboxylase domain of2 curf from lyngbya majuscula 18 c3p5mB_ 99.0 20 PDB header:isomerase Chain: B: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium avium 19 c2iexA_ 99.0 17 PDB header:lyase Chain: A: PDB Molecule:dihydroxynapthoic acid synthetase; PDBTitle: crystal structure of dihydroxynapthoic acid synthetase (gk2873) from2 geobacillus kaustophilus hta426 20 c3fduF_ 98.9 20 PDB header:isomerase Chain: F: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a putative enoyl-coa hydratase/isomerase from2 acinetobacter baumannii 21 c2j5iF_ not modelled 98.9 20 PDB header:lyase Chain: F: PDB Molecule:p-hydroxycinnamoyl coa hydratase/lyase; PDBTitle: crystal structure of hydroxycinnamoyl-coa hydratase-lyase 22 c2d3tB_ not modelled 98.9 22 PDB header:lyase, oxidoreductase/transferase Chain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v 23 c3he2C_ not modelled 98.9 16 PDB header:lyase Chain: C: PDB Molecule:enoyl-coa hydratase echa6; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis 24 d1rjma_ not modelled 98.9 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 25 d1sg4a1 not modelled 98.9 21 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 26 d1wz8a1 not modelled 98.9 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 27 c3h81A_ not modelled 98.9 19 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase echa8; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis 28 c3r6hA_ not modelled 98.9 16 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa3; PDBTitle: crystal structure of an enoyl-coa hydratase (echa3) from mycobacterium2 marinum 29 d1q52a_ not modelled 98.9 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 30 c3lkeA_ not modelled 98.9 10 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from bacillus2 halodurans 31 c3hrxD_ not modelled 98.8 23 PDB header:lyase Chain: D: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of phenylacetic acid degradation protein paag 32 d1xx4a_ not modelled 98.8 23 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 33 c2x58B_ not modelled 98.8 15 PDB header:oxidoreductase Chain: B: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: the crystal structure of mfe1 liganded with coa 34 c3h0uB_ not modelled 98.8 15 PDB header:lyase Chain: B: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of a putative enoyl-coa hydratase from2 streptomyces avermitilis 35 d2f6qa1 not modelled 98.8 19 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 36 c2wtbA_ not modelled 98.8 22 PDB header:oxidoreductase Chain: A: PDB Molecule:fatty acid multifunctional protein (atmfp2); PDBTitle: arabidopsis thaliana multifuctional protein, mfp2 37 c3kqfC_ not modelled 98.8 20 PDB header:isomerase Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: 1.8 angstrom resolution crystal structure of enoyl-coa hydratase from2 bacillus anthracis. 38 d1wdka4 not modelled 98.8 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 39 c1rjnC_ not modelled 98.8 19 PDB header:lyase Chain: C: PDB Molecule:menb; PDBTitle: the crystal structure of menb (rv0548c) from mycobacterium2 tuberculosis in complex with the coa portion of naphthoyl coa 40 c3p85A_ not modelled 98.8 21 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure enoyl-coa hydratase from mycobacterium avium 41 c3moyA_ not modelled 98.8 18 PDB header:lyase Chain: A: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of probable enoyl-coa hydratase from mycobacterium2 smegmatis 42 d1nzya_ not modelled 98.8 19 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 43 c3njbA_ not modelled 98.8 22 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium smegmatis,2 iodide soak 44 c3h02F_ not modelled 98.7 20 PDB header:lyase Chain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium. 45 c3isaA_ not modelled 98.7 12 PDB header:hydrolase Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of putative enoyl-coa hydratase/isomerase from2 bordetella parapertussis 46 c3qreA_ not modelled 98.7 16 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa12_1; PDBTitle: crystal structure of an enoyl-coa hydratase echa12_1 from2 mycobacterium marinum 47 c3sllC_ not modelled 98.7 20 PDB header:isomerase Chain: C: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 48 c3q1tB_ not modelled 98.7 19 PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium avium 49 c2qq3F_ not modelled 98.7 21 PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase subunit i; PDBTitle: crystal structure of enoyl-coa hydrates subunit i (gk_2039)2 other form from geobacillus kaustophilus hta426 50 c3mybA_ not modelled 98.7 18 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase mycobacterium smegmatis 51 c3rrvC_ not modelled 98.7 18 PDB header:isomerase Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium paratuberculosis 52 c3rsiA_ not modelled 98.7 20 PDB header:isomerase Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: the structure of a putative enoyl-coa hydratase/isomerase from2 mycobacterium abscessus atcc 19977 / dsm 44196 53 c3i47A_ not modelled 98.7 21 PDB header:lyase Chain: A: PDB Molecule:enoyl coa hydratase/isomerase (crotonase); PDBTitle: crystal structure of putative enoyl coa hydratase/isomerase2 (crotonase) from legionella pneumophila subsp. pneumophila str.3 philadelphia 1 54 c2fbmB_ not modelled 98.7 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:y chromosome chromodomain protein 1, telomeric isoform b; PDBTitle: acetyltransferase domain of cdy1 55 c2f6qA_ not modelled 98.7 19 PDB header:isomerase Chain: A: PDB Molecule:peroxisomal 3,2-trans-enoyl-coa isomerase; PDBTitle: the crystal structure of human peroxisomal delta3, delta2 enoyl coa2 isomerase (peci) 56 d1hzda_ not modelled 98.7 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 57 c2vx2D_ not modelled 98.7 17 PDB header:isomerase Chain: D: PDB Molecule:enoyl-coa hydratase domain-containing protein 3; PDBTitle: crystal structure of human enoyl coenzyme a hydratase2 domain-containing protein 3 (echdc3) 58 c2hw5F_ not modelled 98.7 21 PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase; PDBTitle: the crystal structure of human enoyl-coenzyme a (coa) hydratase short2 chain 1, echs1 59 c3l3sF_ not modelled 98.7 18 PDB header:isomerase Chain: F: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of an enoyl-coa hydrotase/isomerase family2 protein from silicibacter pomeroyi 60 c2ppyE_ not modelled 98.6 17 PDB header:lyase Chain: E: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydrates (gk_1992) from geobacillus2 kaustophilus hta426 61 d2a7ka1 not modelled 98.6 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 62 c3omeE_ not modelled 98.6 18 PDB header:lyase Chain: E: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of a probable enoyl-coa hydratase from mycobacterium2 smegmatis 63 c3qxiA_ not modelled 98.6 15 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase echa1; PDBTitle: crystal structure of enoyl-coa hydratase echa1 from mycobacterium2 marinum 64 c3ju1A_ not modelled 98.6 18 PDB header:lyase, isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of enoyl-coa hydratase/isomerase family protein 65 d1szoa_ not modelled 98.6 12 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 66 c3g64A_ not modelled 98.6 21 PDB header:lyase Chain: A: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of putative enoyl-coa hydratase from streptomyces2 coelicolor a3(2) 67 d1mj3a_ not modelled 98.6 21 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 68 d1dcia_ not modelled 98.6 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 69 c3gkbA_ not modelled 98.6 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of a putative enoyl-coa hydratase from streptomyces2 avermitilis 70 d1ef8a_ not modelled 98.6 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 71 c3oc7A_ not modelled 98.5 18 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of an enoyl-coa hydratase from mycobacterium avium 72 c3hinA_ not modelled 98.5 16 PDB header:lyase Chain: A: PDB Molecule:putative 3-hydroxybutyryl-coa dehydratase; PDBTitle: crystal structure of putative enoyl-coa hydratase from2 rhodopseudomonas palustris cga009 73 d2fw2a1 not modelled 98.5 16 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 74 d1uiya_ not modelled 98.5 19 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 75 c3qmjA_ not modelled 98.5 21 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa8_6; PDBTitle: crystal structure of enoyl-coa hydratase echa8_6 from mycobacterium2 marinum 76 c2f9iC_ not modelled 98.5 17 PDB header:transferase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus 77 c3r0oA_ not modelled 98.5 20 PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium 78 c3qxzA_ not modelled 98.4 23 PDB header:lyase,isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 79 c3hp0B_ not modelled 98.4 18 PDB header:lyase Chain: B: PDB Molecule:putative polyketide biosynthesis enoyl-coa PDBTitle: crystal structure of a putative polyketide biosynthesis2 enoyl-coa hydratase (pksh) from bacillus subtilis 80 c2w3pB_ not modelled 98.4 19 PDB header:lyase Chain: B: PDB Molecule:benzoyl-coa-dihydrodiol lyase; PDBTitle: boxc crystal structure 81 c3trrA_ not modelled 98.4 17 PDB header:isomerase Chain: A: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 82 c3bptA_ not modelled 98.4 14 PDB header:hydrolase Chain: A: PDB Molecule:3-hydroxyisobutyryl-coa hydrolase; PDBTitle: crystal structure of human beta-hydroxyisobutyryl-coa hydrolase in2 complex with quercetin 83 c3ot6A_ not modelled 98.4 17 PDB header:isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase family protein2 from psudomonas syringae 84 c3swxB_ not modelled 98.4 19 PDB header:isomerase Chain: B: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 85 c2j5gL_ not modelled 98.3 19 PDB header:hydrolase Chain: L: PDB Molecule:alr4455 protein; PDBTitle: the native structure of a beta-diketone hydrolase from the2 cyanobacterium anabaena sp. pcc 7120 86 d1pjha_ not modelled 98.3 12 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 87 c3laoA_ not modelled 98.3 17 PDB header:lyase, isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of enoyl-coa hydratase from pseudomonas2 aeruginosa pa01 88 d2f9ya1 not modelled 98.3 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 89 c3m6nA_ not modelled 98.2 18 PDB header:lyase Chain: A: PDB Molecule:rpff protein; PDBTitle: crystal structure of rpff 90 c2pg8C_ not modelled 98.1 16 PDB header:ligand binding protein Chain: C: PDB Molecule:dpgc; PDBTitle: crystal structure of r254k mutanat of dpgc with bound substrate analog 91 c3qkaB_ not modelled 98.0 22 PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase, echa5; PDBTitle: crystal structure of enoyl-coa hydratase echa5 from mycobacterium2 marinum 92 d1on3a2 not modelled 97.8 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 93 d1vrga2 not modelled 97.6 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 94 d1on3a1 not modelled 97.5 16 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 95 d2a7sa2 not modelled 97.5 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 96 c2f9iD_ not modelled 97.5 19 PDB header:transferase Chain: D: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus 97 d1xnya2 not modelled 97.5 20 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 98 d2f9yb1 not modelled 97.4 13 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 99 c2f9yB_ not modelled 97.4 13 PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit PDBTitle: the crystal structure of the carboxyltransferase subunit of acc from2 escherichia coli 100 d1pixa2 not modelled 97.4 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 101 c3glmD_ not modelled 97.2 20 PDB header:lyase Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa 102 c1on3E_ not modelled 97.1 15 PDB header:transferase Chain: E: PDB Molecule:methylmalonyl-coa carboxyltransferase 12s PDBTitle: transcarboxylase 12s crystal structure: hexamer assembly2 and substrate binding to a multienzyme core (with3 methylmalonyl-coenzyme a and methylmalonic acid bound) 103 c3u9rB_ not modelled 97.0 14 PDB header:ligase Chain: B: PDB Molecule:methylcrotonyl-coa carboxylase, beta-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc), beta subunit 104 c1vrgE_ not modelled 96.9 17 PDB header:ligase Chain: E: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of propionyl-coa carboxylase, beta subunit (tm0716)2 from thermotoga maritima at 2.30 a resolution 105 c1pixB_ not modelled 96.8 17 PDB header:lyase Chain: B: PDB Molecule:glutaconyl-coa decarboxylase a subunit; PDBTitle: crystal structure of the carboxyltransferase subunit of the2 bacterial ion pump glutaconyl-coenzyme a decarboxylase 106 d2a7sa1 not modelled 96.7 13 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 107 d1vrga1 not modelled 96.7 16 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 108 c1xnwD_ not modelled 96.7 18 PDB header:ligase Chain: D: PDB Molecule:propionyl-coa carboxylase complex b subunit; PDBTitle: acyl-coa carboxylase beta subunit from s. coelicolor (pccb),2 apo form #2, mutant d422i 109 c3n6rF_ not modelled 96.7 13 PDB header:ligase Chain: F: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) 110 d1xnya1 not modelled 96.7 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 111 c1x0uB_ not modelled 96.5 17 PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii 112 c2a7sD_ not modelled 96.5 14 PDB header:ligase Chain: D: PDB Molecule:probable propionyl-coa carboxylase beta chain 5; PDBTitle: crystal structure of the acyl-coa carboxylase, accd5, from2 mycobacterium tuberculosis 113 d1pixa3 not modelled 95.6 12 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 114 c1uytC_ not modelled 90.5 20 PDB header:transferase Chain: C: PDB Molecule:acetyl-coa carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain 115 c1od4C_ not modelled 89.7 19 PDB header:ligase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain 116 c2x24B_ not modelled 88.6 18 PDB header:ligase Chain: B: PDB Molecule:acetyl-coa carboxylase; PDBTitle: bovine acc2 ct domain in complex with inhibitor 117 c3h0jA_ not modelled 86.8 19 PDB header:transferase Chain: A: PDB Molecule:acetyl-coa carboxylase; PDBTitle: crystal structure of the carboxyltransferase domain of2 acetyl-coenzyme a carboxylase in complex with compound 2 118 d1euca2 not modelled 84.8 12 Fold:Flavodoxin-like Superfamily:Succinyl-CoA synthetase domains Family:Succinyl-CoA synthetase domains 119 c3ff6D_ not modelled 84.5 18 PDB header:ligase Chain: D: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: human acc2 ct domain with cp-640186 120 d1h4xa_ not modelled 82.2 17 Fold:SpoIIaa-like Superfamily:SpoIIaa-like Family:Anti-sigma factor antagonist SpoIIaa

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0