Fold library entry viewer: c1od4C_

Added to library: Tue Mar 16 14:40:55 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	W	L	Q	P	K	R	Y	K	A	H	L	X	G	T	T	Y	V	Y	D	F	P	E	L	F	R	Q	A	S	S	S	Q	W	K	N	F	S	A	D	V	K	L	T	D	D	F	F	I	S	N	E	L	I	E	D	E	N	G	E	L	T	E	V	E	R	E	P	G	A	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T	S			G	G	G																		T	T					G	G	G										T	T	S									T	T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	G	X	V	A	F	K	I	T	V	K	T	P	E	Y	P	R	G	R	Q	F	V	V	V	A	N	D	I	T	F	K	I	G	S	F	G	P	Q	E	D	E	F	F	N	K	V	T	E	Y	A	R	K	R	G	I	P	R	I	Y	L	A	A	N	S	G	A	R	I	G	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S											S	S		T	T											T	T	S	G	G	G		B																			T											S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	E	E	I	V	P	L	F	Q	V	A	W	N	D	A	A	N	P	D	K	G	F	Q	Y	L	Y	L	T	S	E	G	X	E	T	L	K	K	F	D	K	E	N	S	V	L	T	E	R	T	V	I	N	G	E	E	R	F	V	I	K	T	I	I	G	S	E	D	G	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T	T	S						S	S	T	T		T	T	S																			T		T	T	S									S	S	S											S	S	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	E	C	L	R	G	S	G	L	I	A	G	A	T	S	R	A	Y	H	D	I	F	T	I	T	L	V	T	C	R	S	V	G	I	G	A	Y	L	V	R	L	G	Q	R	A	I	Q	V	E	G	Q	P	I	I	L	T	G	A	P	A	I	N	K	X	L	G	R	E	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	S								S				T									T							T	T					S	S										T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	S	N	L	Q	L	G	G	T	Q	I	X	Y	N	N	G	V	S	H	L	T	A	V	D	D	L	A	G	V	E	K	I	V	E	W	X	S	Y	V	P	A	K	R	N	X	P	V	P	I	L	E	T	K	D	T	W	D	R	P	V	D	F	T	P	T	N	D	E	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T					S								T	S		S				S	S												G	G	G	S		S	S	T	T	S								S	S		S	S	S							B	T	T	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	V	R	W	X	I	E	G	R	E	T	E	S	G	F	E	Y	G	L	F	D	K	G	S	F	F	E	T	L	S	G	W	A	K	G	V	V	V	G	R	A	R	L	G	G	I	P	L	G	V	I	G	V	E	T	R	T	V	E	N	L	I	P	A	D	P	A	N	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B			T	T			B			S	S		T	T						S	T	T	S		T	T									T	T											S										T	T	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	A	E	T	L	I	Q	E	P	G	Q	V	W	H	P	N	S	A	F	K	T	A	Q	A	I	N	D	F	N	N	G	E	Q	L	P	X	X	I	L	A	N	W	R	G	F	S	G	G	Q	R	D	X	F	N	E	V	L	K	Y	G	S	F	I	V	D	A	L	V	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T																				T	S																S						T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	Q	P	I	I	I	Y	I	P	P	T	G	E	L	R	G	G	S	W	V	V	V	D	P	T	I	N	A	D	Q	X	E	X	Y	A	D	V	N	A	R	A	G	V	L	E	P	Q	G	X	V	G	I	K	F	R	R	E	K	L	L	D	T	X	N	R	L	E	L	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S								T	T									G	G	G		G	G	G	G	T	T	T							T	T					S	S										S										T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	Y	G	Q	I	S	L	Q	F	A	D	L	H	D	R	S	S	R	X	V	A	K	G	V	I	S	K	E	L	E	W	T	E	A	R	R	F	F	F	W	R	L	R	R	R	L	N	E	E	Y	L	I	K	R	L	S	H	Q	V	G	E	A	S	R	L	E	K	I	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S	S							T	T		S	S																															S	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Sequence	I	R	S	W	Y	P	A	S	V	D	H	E	D	D	R	Q	V	A	T	W	I	E	E	N	Y	K	T	L	D	D	K	L	K	G	L	K	L	E	S	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S	S		T	T	S		T	T											T	T													T	T

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PDB structure

FASTA sequence

Hidden Markov model

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