Phyre 2 alignment of P0AG14 with d2nu7a2

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Job Description | P0AG14
Confidence | 41.71% | Date | Thu Jan 5 11:27:48 GMT 2012
Rank | 156 | Aligned Residues | 54
% Identity | 17% | Template | d2nu7a2
SCOP info | Flavodoxin-like | Succinyl-CoA synthetase domains | Succinyl-CoA synthetase domains
Resolution | 2.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | E | I | T | A | V | L | A | A | F | K | P | Q | D | Q | V | V | L | R | L | E | S | P | G | G | M | V | H | G | Y | G | L | A | A | S | Q | L | Q | R | L | R | D | K | N | I | P | L | T | V | T | V | D | K | V | A | A | S | G | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | D | I | L | E | M | F | E | K | D | P | Q | T | E | A | I | V | M | I | G | E | I | G | G | S | A | . | . | . | . | E | E | E | A | A | A | Y | I | K | E | H | V | T | K | . | P | V | V | G | Y | I | A | G | V | T | A | P | K | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T |  | T | T |  |  |  |  |  |  |  |  |  | S | S | S | S |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | S | . |  |  |  |  |  |  |  |  | T | T |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |  |  |  |  | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |  | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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