Phyre 2 Results for P0AG14

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Email | l.a.kelley@imperial.ac.uk
Description | P0AG14
Date | Thu Jan 5 11:27:48 GMT 2012
Unique Job ID | d5d7544fe5e0cacd

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c3bezC_
Top template information
PDB header:hydrolase Chain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals
Confidence and coverage
Confidence: | 100.0% | Coverage: | 87%
302 residues ( 87% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | E | L | L | S | E | Y | G | L | F | L | A | K | I | V | T | V | V | L | A | I | A | A | I | A | A | I | I | V | N | V | A | Q | R | N | K | R | Q | R | G | E | L | R | V | N | N | L | S | E | Q | Y | K | E | M | K | E | E | L | A | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | A | L | M | D | S | H | Q | Q | K | Q | W | H | K | A | Q | K | K | K | H | K | Q | E | A | K | A | A | K | A | K | A | K | L | G | E | V | A | T | D | S | K | P | R | V | W | V | L | D | F | K | G | S | M | D | A | H | E | V | N | S | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  | ? | ? | ? | ? |  |  |  |  |  |  |  |  | ? |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | R | E | E | I | T | A | V | L | A | A | F | K | P | Q | D | Q | V | V | L | R | L | E | S | P | G | G | M | V | H | G | Y | G | L | A | A | S | Q | L | Q | R | L | R | D | K | N | I | P | L | T | V | T | V | D | K | V | A | A | S | G | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | Y | M | M | A | C | V | A | D | K | I | V | S | A | P | F | A | I | V | G | S | I | G | V | V | A | Q | M | P | N | F | N | R | F | L | K | S | K | D | I | D | I | E | L | H | T | A | G | Q | Y | K | R | T | L | T | L | L | G | E | N | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | E | E | G | R | E | K | F | R | E | E | L | N | E | T | H | Q | L | F | K | D | F | V | K | R | M | R | P | S | L | D | I | E | Q | V | A | T | G | E | H | W | Y | G | Q | Q | A | V | E | K | G | L | V | D | E | I | N | T | S | D | E | V
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | .
Sequence |  | I | L | S | L | M | E | G | R | E | V | V | N | V | R | Y | M | Q | R | K | R | L | I | D | R | F | T | G | S | A | A | E | S | A | D | R | L | L | L | R | W | W | Q | R | G | Q | K | P | L | M
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c3bezC_ |

### PDB 3bez chain C

Region: 12 - 314
Aligned: 302
Modelled: 303
Confidence: 100.0%
Identity: 22%
PDB header:hydrolase
Chain: C: PDB Molecule:protease 4;
PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals

Phyre2
2 |
| c3p2lD_ |

### PDB 3p2l chain D

Region: 105 - 300
Aligned: 162
Modelled: 166
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit;
PDBTitle: crystal structure of atp-dependent clp protease subunit p from2 francisella tularensis

Phyre2
3 |
| c2deoA_ |

### PDB 2deo chain A

Region: 99 - 330
Aligned: 182
Modelled: 186
Confidence: 99.9%
Identity: 16%
PDB header:hydrolase
Chain: A: PDB Molecule:441aa long hypothetical nfed protein;
PDBTitle: 1510-n membrane protease specific for a stomatin homolog from2 pyrococcus horikoshii

Phyre2
4 |
| d1yg6a1 |

### PDB 1yg6 chain A domain 1

Region: 105 - 299
Aligned: 161
Modelled: 164
Confidence: 99.9%
Identity: 22%
Fold: ClpP/crotonase
Superfamily: ClpP/crotonase
Family: Clp protease, ClpP subunit

Phyre2
5 |
| c3kthD_ |

### PDB 3kth chain D

Region: 105 - 299
Aligned: 161
Modelled: 165
Confidence: 99.9%
Identity: 20%
PDB header:hydrolase
Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit;
PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form

Phyre2
6 |
| c1tg6G_ |

### PDB 1tg6 chain G

Region: 105 - 294
Aligned: 156
Modelled: 160
Confidence: 99.9%
Identity: 16%
PDB header:hydrolase
Chain: G: PDB Molecule:putative atp-dependent clp protease proteolytic subunit;
PDBTitle: crystallography and mutagenesis point to an essential role for the n-2 terminus of human mitochondrial clpp

Phyre2
7 |
| c3q7hM_ |

### PDB 3q7h chain M

Region: 105 - 296
Aligned: 158
Modelled: 162
Confidence: 99.9%
Identity: 20%
PDB header:hydrolase
Chain: M: PDB Molecule:atp-dependent clp protease proteolytic subunit;
PDBTitle: structure of the clpp subunit of the atp-dependent clp protease from2 coxiella burnetii

Phyre2
8 |
| d1tg6a1 |

### PDB 1tg6 chain A domain 1

Region: 105 - 296
Aligned: 158
Modelled: 162
Confidence: 99.9%
Identity: 16%
Fold: ClpP/crotonase
Superfamily: ClpP/crotonase
Family: Clp protease, ClpP subunit

Phyre2
9 |
| c2cbyG_ |

### PDB 2cby chain G

Region: 105 - 296
Aligned: 148
Modelled: 152
Confidence: 99.9%
Identity: 22%
PDB header:hydrolase
Chain: G: PDB Molecule:atp-dependent clp protease proteolytic subunit 1;
PDBTitle: crystal structure of the atp-dependent clp protease2 proteolytic subunit 1 (clpp1) from mycobacterium3 tuberculosis

Phyre2
10 |
| d2cbya1 |

### PDB 2cby chain A domain 1

Region: 105 - 296
Aligned: 148
Modelled: 152
Confidence: 99.9%
Identity: 22%
Fold: ClpP/crotonase
Superfamily: ClpP/crotonase
Family: Clp protease, ClpP subunit

Phyre2
11 |
| d1y7oa1 |

### PDB 1y7o chain A domain 1

Region: 105 - 296
Aligned: 148
Modelled: 148
Confidence: 99.9%
Identity: 22%
Fold: ClpP/crotonase
Superfamily: ClpP/crotonase
Family: Clp protease, ClpP subunit

Phyre2
12 |
| d2f6ia1 |

### PDB 2f6i chain A domain 1

Region: 105 - 296
Aligned: 147
Modelled: 154
Confidence: 99.9%
Identity: 17%
Fold: ClpP/crotonase
Superfamily: ClpP/crotonase
Family: Clp protease, ClpP subunit

Phyre2
13 |
| c2f6iG_ |

### PDB 2f6i chain G

Region: 105 - 296
Aligned: 147
Modelled: 157
Confidence: 99.9%
Identity: 14%
PDB header:hydrolase
Chain: G: PDB Molecule:atp-dependent clp protease, putative;
PDBTitle: crystal structure of the clpp protease catalytic domain from2 plasmodium falciparum

Phyre2
14 |
| c1y7oE_ |

### PDB 1y7o chain E

Region: 105 - 296
Aligned: 148
Modelled: 143
Confidence: 99.9%
Identity: 22%
PDB header:hydrolase
Chain: E: PDB Molecule:atp-dependent clp protease proteolytic subunit;
PDBTitle: the structure of streptococcus pneumoniae a153p clpp

Phyre2
15 |
| c2ej5B_ |

### PDB 2ej5 chain B

Region: 98 - 306
Aligned: 161
Modelled: 161
Confidence: 99.1%
Identity: 20%
PDB header:lyase
Chain: B: PDB Molecule:enoyl-coa hydratase subunit ii;
PDBTitle: crystal structure of gk2038 protein (enoyl-coa hydratase subunit ii)2 from geobacillus kaustophilus

Phyre2
16 |
| c3peaD_ |

### PDB 3pea chain D

Region: 98 - 308
Aligned: 163
Modelled: 163
Confidence: 99.1%
Identity: 16%
PDB header:isomerase
Chain: D: PDB Molecule:enoyl-coa hydratase/isomerase family protein;
PDBTitle: crystal structure of enoyl-coa hydratase from bacillus anthracis str.2 'ames ancestor'

Phyre2
17 |
| c2q35A_ |

### PDB 2q35 chain A

Region: 95 - 347
Aligned: 205
Modelled: 205
Confidence: 99.0%
Identity: 17%
PDB header:lyase
Chain: A: PDB Molecule:curf;
PDBTitle: crystal structure of the y82f variant of ech2 decarboxylase domain of2 curf from lyngbya majuscula

Phyre2
18 |
| c3p5mB_ |

### PDB 3p5m chain B

Region: 98 - 306
Aligned: 161
Modelled: 161
Confidence: 99.0%
Identity: 20%
PDB header:isomerase
Chain: B: PDB Molecule:enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium avium

Phyre2
19 |
| c2iexA_ |

### PDB 2iex chain A

Region: 98 - 306
Aligned: 161
Modelled: 161
Confidence: 99.0%
Identity: 17%
PDB header:lyase
Chain: A: PDB Molecule:dihydroxynapthoic acid synthetase;
PDBTitle: crystal structure of dihydroxynapthoic acid synthetase (gk2873) from2 geobacillus kaustophilus hta426

Phyre2
20 |
| c3fduF_ |

### PDB 3fdu chain F

Region: 98 - 343
Aligned: 198
Modelled: 198
Confidence: 98.9%
Identity: 20%
PDB header:isomerase
Chain: F: PDB Molecule:putative enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of a putative enoyl-coa hydratase/isomerase from2 acinetobacter baumannii

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3bezC_ |
|  | 100.0 | 22 | PDB header:hydrolase Chain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals
2 | c3p2lD_ |
|  | 100.0 | 17 | PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: crystal structure of atp-dependent clp protease subunit p from2 francisella tularensis
3 | c2deoA_ |
|  | 99.9 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:441aa long hypothetical nfed protein; PDBTitle: 1510-n membrane protease specific for a stomatin homolog from2 pyrococcus horikoshii
4 | d1yg6a1 |
|  | 99.9 | 22 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit
5 | c3kthD_ |
|  | 99.9 | 20 | PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form
6 | c1tg6G_ |
|  | 99.9 | 16 | PDB header:hydrolase Chain: G: PDB Molecule:putative atp-dependent clp protease proteolytic subunit; PDBTitle: crystallography and mutagenesis point to an essential role for the n-2 terminus of human mitochondrial clpp
7 | c3q7hM_ |
|  | 99.9 | 20 | PDB header:hydrolase Chain: M: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of the clpp subunit of the atp-dependent clp protease from2 coxiella burnetii
8 | d1tg6a1 |
|  | 99.9 | 16 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit
9 | c2cbyG_ |
|  | 99.9 | 22 | PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease proteolytic subunit 1; PDBTitle: crystal structure of the atp-dependent clp protease2 proteolytic subunit 1 (clpp1) from mycobacterium3 tuberculosis
10 | d2cbya1 |
|  | 99.9 | 22 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit
11 | d1y7oa1 |
|  | 99.9 | 22 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit
12 | d2f6ia1 |
|  | 99.9 | 17 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit
13 | c2f6iG_ |
|  | 99.9 | 14 | PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease, putative; PDBTitle: crystal structure of the clpp protease catalytic domain from2 plasmodium falciparum
14 | c1y7oE_ |
|  | 99.9 | 22 | PDB header:hydrolase Chain: E: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: the structure of streptococcus pneumoniae a153p clpp
15 | c2ej5B_ |
|  | 99.1 | 20 | PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase subunit ii; PDBTitle: crystal structure of gk2038 protein (enoyl-coa hydratase subunit ii)2 from geobacillus kaustophilus
16 | c3peaD_ |
|  | 99.1 | 16 | PDB header:isomerase Chain: D: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of enoyl-coa hydratase from bacillus anthracis str.2 'ames ancestor'
17 | c2q35A_ |
|  | 99.0 | 17 | PDB header:lyase Chain: A: PDB Molecule:curf; PDBTitle: crystal structure of the y82f variant of ech2 decarboxylase domain of2 curf from lyngbya majuscula
18 | c3p5mB_ |
|  | 99.0 | 20 | PDB header:isomerase Chain: B: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium avium
19 | c2iexA_ |
|  | 99.0 | 17 | PDB header:lyase Chain: A: PDB Molecule:dihydroxynapthoic acid synthetase; PDBTitle: crystal structure of dihydroxynapthoic acid synthetase (gk2873) from2 geobacillus kaustophilus hta426
20 | c3fduF_ |
|  | 98.9 | 20 | PDB header:isomerase Chain: F: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a putative enoyl-coa hydratase/isomerase from2 acinetobacter baumannii
21 | c2j5iF_ |
| not modelled | 98.9 | 20 | PDB header:lyase Chain: F: PDB Molecule:p-hydroxycinnamoyl coa hydratase/lyase; PDBTitle: crystal structure of hydroxycinnamoyl-coa hydratase-lyase
22 | c2d3tB_ |
| not modelled | 98.9 | 22 | PDB header:lyase, oxidoreductase/transferase Chain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v
23 | c3he2C_ |
| not modelled | 98.9 | 16 | PDB header:lyase Chain: C: PDB Molecule:enoyl-coa hydratase echa6; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis
24 | d1rjma_ |
| not modelled | 98.9 | 18 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
25 | d1sg4a1 |
| not modelled | 98.9 | 21 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
26 | d1wz8a1 |
| not modelled | 98.9 | 22 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
27 | c3h81A_ |
| not modelled | 98.9 | 19 | PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase echa8; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis
28 | c3r6hA_ |
| not modelled | 98.9 | 16 | PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa3; PDBTitle: crystal structure of an enoyl-coa hydratase (echa3) from mycobacterium2 marinum
29 | d1q52a_ |
| not modelled | 98.9 | 18 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
30 | c3lkeA_ |
| not modelled | 98.9 | 10 | PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from bacillus2 halodurans
31 | c3hrxD_ |
| not modelled | 98.8 | 23 | PDB header:lyase Chain: D: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of phenylacetic acid degradation protein paag
32 | d1xx4a_ |
| not modelled | 98.8 | 23 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
33 | c2x58B_ |
| not modelled | 98.8 | 15 | PDB header:oxidoreductase Chain: B: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: the crystal structure of mfe1 liganded with coa
34 | c3h0uB_ |
| not modelled | 98.8 | 15 | PDB header:lyase Chain: B: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of a putative enoyl-coa hydratase from2 streptomyces avermitilis
35 | d2f6qa1 |
| not modelled | 98.8 | 19 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
36 | c2wtbA_ |
| not modelled | 98.8 | 22 | PDB header:oxidoreductase Chain: A: PDB Molecule:fatty acid multifunctional protein (atmfp2); PDBTitle: arabidopsis thaliana multifuctional protein, mfp2
37 | c3kqfC_ |
| not modelled | 98.8 | 20 | PDB header:isomerase Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: 1.8 angstrom resolution crystal structure of enoyl-coa hydratase from2 bacillus anthracis.
38 | d1wdka4 |
| not modelled | 98.8 | 22 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
39 | c1rjnC_ |
| not modelled | 98.8 | 19 | PDB header:lyase Chain: C: PDB Molecule:menb; PDBTitle: the crystal structure of menb (rv0548c) from mycobacterium2 tuberculosis in complex with the coa portion of naphthoyl coa
40 | c3p85A_ |
| not modelled | 98.8 | 21 | PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure enoyl-coa hydratase from mycobacterium avium
41 | c3moyA_ |
| not modelled | 98.8 | 18 | PDB header:lyase Chain: A: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of probable enoyl-coa hydratase from mycobacterium2 smegmatis
42 | d1nzya_ |
| not modelled | 98.8 | 19 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
43 | c3njbA_ |
| not modelled | 98.8 | 22 | PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium smegmatis,2 iodide soak
44 | c3h02F_ |
| not modelled | 98.7 | 20 | PDB header:lyase Chain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium.
45 | c3isaA_ |
| not modelled | 98.7 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of putative enoyl-coa hydratase/isomerase from2 bordetella parapertussis
46 | c3qreA_ |
| not modelled | 98.7 | 16 | PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa12_1; PDBTitle: crystal structure of an enoyl-coa hydratase echa12_1 from2 mycobacterium marinum
47 | c3sllC_ |
| not modelled | 98.7 | 20 | PDB header:isomerase Chain: C: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus
48 | c3q1tB_ |
| not modelled | 98.7 | 19 | PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium avium
49 | c2qq3F_ |
| not modelled | 98.7 | 21 | PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase subunit i; PDBTitle: crystal structure of enoyl-coa hydrates subunit i (gk_2039)2 other form from geobacillus kaustophilus hta426
50 | c3mybA_ |
| not modelled | 98.7 | 18 | PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase mycobacterium smegmatis
51 | c3rrvC_ |
| not modelled | 98.7 | 18 | PDB header:isomerase Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium paratuberculosis
52 | c3rsiA_ |
| not modelled | 98.7 | 20 | PDB header:isomerase Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: the structure of a putative enoyl-coa hydratase/isomerase from2 mycobacterium abscessus atcc 19977 / dsm 44196
53 | c3i47A_ |
| not modelled | 98.7 | 21 | PDB header:lyase Chain: A: PDB Molecule:enoyl coa hydratase/isomerase (crotonase); PDBTitle: crystal structure of putative enoyl coa hydratase/isomerase2 (crotonase) from legionella pneumophila subsp. pneumophila str.3 philadelphia 1
54 | c2fbmB_ |
| not modelled | 98.7 | 16 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:y chromosome chromodomain protein 1, telomeric isoform b; PDBTitle: acetyltransferase domain of cdy1
55 | c2f6qA_ |
| not modelled | 98.7 | 19 | PDB header:isomerase Chain: A: PDB Molecule:peroxisomal 3,2-trans-enoyl-coa isomerase; PDBTitle: the crystal structure of human peroxisomal delta3, delta2 enoyl coa2 isomerase (peci)
56 | d1hzda_ |
| not modelled | 98.7 | 17 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
57 | c2vx2D_ |
| not modelled | 98.7 | 17 | PDB header:isomerase Chain: D: PDB Molecule:enoyl-coa hydratase domain-containing protein 3; PDBTitle: crystal structure of human enoyl coenzyme a hydratase2 domain-containing protein 3 (echdc3)
58 | c2hw5F_ |
| not modelled | 98.7 | 21 | PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase; PDBTitle: the crystal structure of human enoyl-coenzyme a (coa) hydratase short2 chain 1, echs1
59 | c3l3sF_ |
| not modelled | 98.7 | 18 | PDB header:isomerase Chain: F: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of an enoyl-coa hydrotase/isomerase family2 protein from silicibacter pomeroyi
60 | c2ppyE_ |
| not modelled | 98.6 | 17 | PDB header:lyase Chain: E: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydrates (gk_1992) from geobacillus2 kaustophilus hta426
61 | d2a7ka1 |
| not modelled | 98.6 | 18 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
62 | c3omeE_ |
| not modelled | 98.6 | 18 | PDB header:lyase Chain: E: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of a probable enoyl-coa hydratase from mycobacterium2 smegmatis
63 | c3qxiA_ |
| not modelled | 98.6 | 15 | PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase echa1; PDBTitle: crystal structure of enoyl-coa hydratase echa1 from mycobacterium2 marinum
64 | c3ju1A_ |
| not modelled | 98.6 | 18 | PDB header:lyase, isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of enoyl-coa hydratase/isomerase family protein
65 | d1szoa_ |
| not modelled | 98.6 | 12 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
66 | c3g64A_ |
| not modelled | 98.6 | 21 | PDB header:lyase Chain: A: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of putative enoyl-coa hydratase from streptomyces2 coelicolor a3(2)
67 | d1mj3a_ |
| not modelled | 98.6 | 21 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
68 | d1dcia_ |
| not modelled | 98.6 | 18 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
69 | c3gkbA_ |
| not modelled | 98.6 | 19 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of a putative enoyl-coa hydratase from streptomyces2 avermitilis
70 | d1ef8a_ |
| not modelled | 98.6 | 17 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
71 | c3oc7A_ |
| not modelled | 98.5 | 18 | PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of an enoyl-coa hydratase from mycobacterium avium
72 | c3hinA_ |
| not modelled | 98.5 | 16 | PDB header:lyase Chain: A: PDB Molecule:putative 3-hydroxybutyryl-coa dehydratase; PDBTitle: crystal structure of putative enoyl-coa hydratase from2 rhodopseudomonas palustris cga009
73 | d2fw2a1 |
| not modelled | 98.5 | 16 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
74 | d1uiya_ |
| not modelled | 98.5 | 19 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
75 | c3qmjA_ |
| not modelled | 98.5 | 21 | PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa8_6; PDBTitle: crystal structure of enoyl-coa hydratase echa8_6 from mycobacterium2 marinum
76 | c2f9iC_ |
| not modelled | 98.5 | 17 | PDB header:transferase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus
77 | c3r0oA_ |
| not modelled | 98.5 | 20 | PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium
78 | c3qxzA_ |
| not modelled | 98.4 | 23 | PDB header:lyase,isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus
79 | c3hp0B_ |
| not modelled | 98.4 | 18 | PDB header:lyase Chain: B: PDB Molecule:putative polyketide biosynthesis enoyl-coa PDBTitle: crystal structure of a putative polyketide biosynthesis2 enoyl-coa hydratase (pksh) from bacillus subtilis
80 | c2w3pB_ |
| not modelled | 98.4 | 19 | PDB header:lyase Chain: B: PDB Molecule:benzoyl-coa-dihydrodiol lyase; PDBTitle: boxc crystal structure
81 | c3trrA_ |
| not modelled | 98.4 | 17 | PDB header:isomerase Chain: A: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus
82 | c3bptA_ |
| not modelled | 98.4 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:3-hydroxyisobutyryl-coa hydrolase; PDBTitle: crystal structure of human beta-hydroxyisobutyryl-coa hydrolase in2 complex with quercetin
83 | c3ot6A_ |
| not modelled | 98.4 | 17 | PDB header:isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase family protein2 from psudomonas syringae
84 | c3swxB_ |
| not modelled | 98.4 | 19 | PDB header:isomerase Chain: B: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus
85 | c2j5gL_ |
| not modelled | 98.3 | 19 | PDB header:hydrolase Chain: L: PDB Molecule:alr4455 protein; PDBTitle: the native structure of a beta-diketone hydrolase from the2 cyanobacterium anabaena sp. pcc 7120
86 | d1pjha_ |
| not modelled | 98.3 | 12 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like
87 | c3laoA_ |
| not modelled | 98.3 | 17 | PDB header:lyase, isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of enoyl-coa hydratase from pseudomonas2 aeruginosa pa01
88 | d2f9ya1 |
| not modelled | 98.3 | 18 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
89 | c3m6nA_ |
| not modelled | 98.2 | 18 | PDB header:lyase Chain: A: PDB Molecule:rpff protein; PDBTitle: crystal structure of rpff
90 | c2pg8C_ |
| not modelled | 98.1 | 16 | PDB header:ligand binding protein Chain: C: PDB Molecule:dpgc; PDBTitle: crystal structure of r254k mutanat of dpgc with bound substrate analog
91 | c3qkaB_ |
| not modelled | 98.0 | 22 | PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase, echa5; PDBTitle: crystal structure of enoyl-coa hydratase echa5 from mycobacterium2 marinum
92 | d1on3a2 |
| not modelled | 97.8 | 17 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
93 | d1vrga2 |
| not modelled | 97.6 | 17 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
94 | d1on3a1 |
| not modelled | 97.5 | 16 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
95 | d2a7sa2 |
| not modelled | 97.5 | 18 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
96 | c2f9iD_ |
| not modelled | 97.5 | 19 | PDB header:transferase Chain: D: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus
97 | d1xnya2 |
| not modelled | 97.5 | 20 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
98 | d2f9yb1 |
| not modelled | 97.4 | 13 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
99 | c2f9yB_ |
| not modelled | 97.4 | 13 | PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit PDBTitle: the crystal structure of the carboxyltransferase subunit of acc from2 escherichia coli
100 | d1pixa2 |
| not modelled | 97.4 | 17 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
101 | c3glmD_ |
| not modelled | 97.2 | 20 | PDB header:lyase Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa
102 | c1on3E_ |
| not modelled | 97.1 | 15 | PDB header:transferase Chain: E: PDB Molecule:methylmalonyl-coa carboxyltransferase 12s PDBTitle: transcarboxylase 12s crystal structure: hexamer assembly2 and substrate binding to a multienzyme core (with3 methylmalonyl-coenzyme a and methylmalonic acid bound)
103 | c3u9rB_ |
| not modelled | 97.0 | 14 | PDB header:ligase Chain: B: PDB Molecule:methylcrotonyl-coa carboxylase, beta-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc), beta subunit
104 | c1vrgE_ |
| not modelled | 96.9 | 17 | PDB header:ligase Chain: E: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of propionyl-coa carboxylase, beta subunit (tm0716)2 from thermotoga maritima at 2.30 a resolution
105 | c1pixB_ |
| not modelled | 96.8 | 17 | PDB header:lyase Chain: B: PDB Molecule:glutaconyl-coa decarboxylase a subunit; PDBTitle: crystal structure of the carboxyltransferase subunit of the2 bacterial ion pump glutaconyl-coenzyme a decarboxylase
106 | d2a7sa1 |
| not modelled | 96.7 | 13 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
107 | d1vrga1 |
| not modelled | 96.7 | 16 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
108 | c1xnwD_ |
| not modelled | 96.7 | 18 | PDB header:ligase Chain: D: PDB Molecule:propionyl-coa carboxylase complex b subunit; PDBTitle: acyl-coa carboxylase beta subunit from s. coelicolor (pccb),2 apo form #2, mutant d422i
109 | c3n6rF_ |
| not modelled | 96.7 | 13 | PDB header:ligase Chain: F: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
110 | d1xnya1 |
| not modelled | 96.7 | 18 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
111 | c1x0uB_ |
| not modelled | 96.5 | 17 | PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii
112 | c2a7sD_ |
| not modelled | 96.5 | 14 | PDB header:ligase Chain: D: PDB Molecule:probable propionyl-coa carboxylase beta chain 5; PDBTitle: crystal structure of the acyl-coa carboxylase, accd5, from2 mycobacterium tuberculosis
113 | d1pixa3 |
| not modelled | 95.6 | 12 | Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain
114 | c1uytC_ |
| not modelled | 90.5 | 20 | PDB header:transferase Chain: C: PDB Molecule:acetyl-coa carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain
115 | c1od4C_ |
| not modelled | 89.7 | 19 | PDB header:ligase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain
116 | c2x24B_ |
| not modelled | 88.6 | 18 | PDB header:ligase Chain: B: PDB Molecule:acetyl-coa carboxylase; PDBTitle: bovine acc2 ct domain in complex with inhibitor
117 | c3h0jA_ |
| not modelled | 86.8 | 19 | PDB header:transferase Chain: A: PDB Molecule:acetyl-coa carboxylase; PDBTitle: crystal structure of the carboxyltransferase domain of2 acetyl-coenzyme a carboxylase in complex with compound 2
118 | d1euca2 |
| not modelled | 84.8 | 12 | Fold:Flavodoxin-like Superfamily:Succinyl-CoA synthetase domains Family:Succinyl-CoA synthetase domains
119 | c3ff6D_ |
| not modelled | 84.5 | 18 | PDB header:ligase Chain: D: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: human acc2 ct domain with cp-640186
120 | d1h4xa_ |
| not modelled | 82.2 | 17 | Fold:SpoIIaa-like Superfamily:SpoIIaa-like Family:Anti-sigma factor antagonist SpoIIaa

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0