17/01/2012 19:18:20 : INFO  : Run start: Tue Jan 17 19:18:18 GMT 2012
17/01/2012 19:18:31 : INFO  : Initialised job
17/01/2012 19:18:34 : INFO  : Renaming log file 'phyre2_20120117_191817.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/d5d7544fe5e0cacd/phyre_20120117_191817.log'
17/01/2012 19:18:37 : INFO  : Initialised job:
Sequence
>batch____
MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRVNNLSEQYKEMKEELAA
ALMDSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPRVWVLDFKGSMDAHEVNSL
REEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGG
YMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENT
EEGREKFREELNETHQLFKDFVKRMRPSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEV
ILSLMEGREVVNVRYMQRKRLIDRFTGSAAESADRLLLRWWQRGQKPLM

17/01/2012 19:18:40 : INFO  : Checked sequence
17/01/2012 19:18:46 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 19:18:49 : INFO  : PSI-BLAST 3 iterations
17/01/2012 19:21:01 : INFO  : PSI-BLAST 5 iterations
17/01/2012 19:22:57 : INFO  : Finished PSI-BLAST
17/01/2012 19:23:02 : INFO  : Running Buildali to generate a3m file
17/01/2012 19:33:17 : INFO  : Converting to HMM
17/01/2012 19:33:22 : INFO  : Calibrating HMM
17/01/2012 19:33:43 : INFO  : Searching HMM database
17/01/2012 19:41:25 : INFO  : Finished buildali
17/01/2012 19:41:29 : INFO  : Predicting secondary structure
17/01/2012 19:41:46 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 19:41:49 : INFO  : Predicting Disordered regions
17/01/2012 19:41:57 : INFO  : Predicted Disorder (Disopred)
17/01/2012 19:42:01 : INFO  : Running memsat_svm check
17/01/2012 19:47:01 : INFO  : Running memsat_svm full
17/01/2012 19:52:30 : INFO  : Predicted Transmembrane (memsat_svm) ID 'd5d7544fe5e0cacd'
17/01/2012 19:52:33 : INFO  : Initialising fold library search
17/01/2012 19:52:40 : INFO  : Initialised search input
17/01/2012 19:52:44 : INFO  : Building Ensemble models
17/01/2012 19:52:50 : INFO  : Building hh.c3bezC_.model.1.pdb
17/01/2012 19:53:20 : INFO  : Building c3bezC_.1.pdb
17/01/2012 19:53:47 : INFO  : Building c3p2lD_.2.pdb
17/01/2012 19:54:13 : INFO  : Building c2deoA_.3.pdb
17/01/2012 19:54:40 : INFO  : Building d1yg6a1.4.pdb
17/01/2012 19:55:07 : INFO  : Building c3kthD_.5.pdb
17/01/2012 19:55:34 : INFO  : Building c1tg6G_.6.pdb
17/01/2012 19:56:01 : INFO  : Building c3q7hM_.7.pdb
17/01/2012 19:56:28 : INFO  : Building d1tg6a1.8.pdb
17/01/2012 19:56:57 : INFO  : Building c2cbyG_.9.pdb
17/01/2012 19:57:23 : INFO  : Building d2cbya1.10.pdb
17/01/2012 19:57:52 : INFO  : Building d1y7oa1.11.pdb
17/01/2012 19:58:19 : INFO  : Building d2f6ia1.12.pdb
17/01/2012 19:58:45 : INFO  : Building c2f6iG_.13.pdb
17/01/2012 19:59:13 : INFO  : Building c1y7oE_.14.pdb
17/01/2012 19:59:39 : INFO  : Building c2ej5B_.15.pdb
17/01/2012 20:00:07 : INFO  : Building c3peaD_.16.pdb
17/01/2012 20:00:37 : INFO  : Building c2q35A_.17.pdb
17/01/2012 20:01:04 : INFO  : Building c3p5mB_.18.pdb
17/01/2012 20:01:28 : INFO  : Building c2iexA_.19.pdb
17/01/2012 20:01:56 : INFO  : Building c3fduF_.20.pdb
17/01/2012 20:02:55 : INFO  : Finished HH model building
17/01/2012 20:02:58 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 20:04:06 : INFO  : html domain output complete ID 'd5d7544fe5e0cacd'
17/01/2012 20:56:23 : INFO  : Run end  : Tue Jan 17 20:56:21 GMT 2012
