PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3h02F_

Fold library id	PDB Header	Molecule	Title
c3h02F_	PDB header: lyase	Chain: F: PDB Molecule: naphthoate synthase;	PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate2 synthase from salmonella typhimurium.

Links to external resources
Added to library: Sat Aug 28 22:15:58 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D E T X L Y A P V E W H D C S E G Y T D I R Y E K S T D G I A K I T I N R P Q V R N A F R P L T V K E X I Q A L A D A R Y D D N V G V I I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T T
S S T T S
G G G T T
B
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T G E G D K A F C A G G D H L N V L D F Q R Q I R T C P K P V V A X V A G Y S I G G G H V L H X X C D L T I A A E N A I F G Q T G P K V G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
B
T
S S
S T S S T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F D G G W G A S Y X A R I V G Q K K A R E I W F L C R Q Y D A Q Q A L D X G L V N T V V P L A D L E K E T V R W C R E X L Q N S P X A L R C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T
T T S S S
G G G T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . .

Sequence L K A A L N A D C D G Q A G L Q E L A G N A T X L F Y X T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	E	T	X	L	Y	A	P	V	E	W	H	D	C	S	E	G	Y	T	D	I	R	Y	E	K	S	T	D	G	I	A	K	I	T	I	N	R	P	Q	V	R	N	A	F	R	P	L	T	V	K	E	X	I	Q	A	L	A	D	A	R	Y	D	D	N	V	G	V	I	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S									T	T		S	S							T	T	S									G	G	G	T	T		B																			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	G	E	G	D	K	A	F	C	A	G	G	D	H	L	N	V	L	D	F	Q	R	Q	I	R	T	C	P	K	P	V	V	A	X	V	A	G	Y	S	I	G	G	G	H	V	L	H	X	X	C	D	L	T	I	A	A	E	N	A	I	F	G	Q	T	G	P	K	V	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S						B				T												S	S								S				T									S	S						T	T											T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	D	G	G	W	G	A	S	Y	X	A	R	I	V	G	Q	K	K	A	R	E	I	W	F	L	C	R	Q	Y	D	A	Q	Q	A	L	D	X	G	L	V	N	T	V	V	P	L	A	D	L	E	K	E	T	V	R	W	C	R	E	X	L	Q	N	S	P	X	A	L	R	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T	T																														T	T	S	S	S					G	G	G														T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Sequence	L	K	A	A	L	N	A	D	C	D	G	Q	A	G	L	Q	E	L	A	G	N	A	T	X	L	F	Y	X	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S																	T	T