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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3bezC_

Fold library idPDB HeaderMoleculeTitle
c3bezC_PDB header: hydrolaseChain: C: PDB Molecule: protease 4;PDBTitle: crystal structure of escherichia coli signal peptide2 peptidase (sppa), semet crystals


Added to library: Tue Mar 16 14:41:40 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SRGALLLDISGVIVDKPQENSLFDIVNTIRQAKDDRNITGIVXDLKNFAGGDQPSXQYIGKALKEFRDSG
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Known secondary structure (DSSP)




S



TT
TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPF
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Known secondary structure (DSSP)

S
B
TTSS
TT

B











TT

TT
GGGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence IRDDXSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDAL
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Known secondary structure (DSSP) T
SS

TS


TTT
TTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIXDGEETQGNVGGDTTAAQ
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Known secondary structure (DSSP)


TTTTSTTTS







S
SSSSS

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSXGGXAASGGYWISTPANYIVANP
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Known secondary structure (DSSP)
TT

B
TT

TTTTT
S
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence STLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLXXQLSIENGYKRFITLVADA
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Known secondary structure (DSSP) T




TT






S
GGG


TTS


 .........430.........440.........450.........460.........470......
Sequence RHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYV
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Known secondary structure (DSSP) T

T
TT
TSS
S

SS
S






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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