Email l.a.kelley@imperial.ac.uk Description P18196 Date Thu Jan 5 11:36:43 GMT 2012 Unique Job ID ba4d00f62aa379ea

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1hf2A_ 100.0 23 PDB header:cell division protein Chain: A: PDB Molecule:septum site-determining protein minc; PDBTitle: crystal structure of the bacterial cell-division inhibitor2 minc from t. maritima 2 d1hf2a1 100.0 27 Fold:Single-stranded right-handed beta-helix Superfamily:Cell-division inhibitor MinC, C-terminal domain Family:Cell-division inhibitor MinC, C-terminal domain 3 c3ghfA_ 99.8 83 PDB header:cell cycle Chain: A: PDB Molecule:septum site-determining protein minc; PDBTitle: crystal structure of the septum site-determining protein2 minc from salmonella typhimurium 4 d1hf2a2 98.5 16 Fold:Cell-division inhibitor MinC, N-terminal domain Superfamily:Cell-division inhibitor MinC, N-terminal domain Family:Cell-division inhibitor MinC, N-terminal domain 5 c1tf2A_ 90.6 25 PDB header:protein transport Chain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: crystal structure of seca:adp in an open conformation from2 bacillus subtilis 6 c1nl3B_ 86.7 27 PDB header:protein transport Chain: B: PDB Molecule:preprotein translocase seca 1 subunit; PDBTitle: crystal structure of the seca protein translocation atpase2 from mycobacterium tuberculosis in apo form 7 c3dl8B_ 84.1 22 PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca 8 c3dinB_ 83.0 25 PDB header:membrane protein, protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase 9 c3juxA_ 82.2 25 PDB header:protein transport Chain: A: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the translocation atpase seca from thermotoga2 maritima 10 c2fsgA_ 81.9 25 PDB header:protein transport Chain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: complex seca:atp from escherichia coli 11 d1nkta4 79.0 29 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 12 d1mzva_ 75.7 15 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 13 c2vdaA_ 74.2 26 PDB header:protein transport Chain: A: PDB Molecule:translocase subunit seca; PDBTitle: solution structure of the seca-signal peptide complex 14 c2dy0A_ 65.4 13 PDB header:transferase Chain: A: PDB Molecule:adenine phosphoribosyltransferase; PDBTitle: crystal structure of project jw0458 from escherichia coli 15 c2pfuA_ 61.4 12 PDB header:transport protein Chain: A: PDB Molecule:biopolymer transport exbd protein; PDBTitle: nmr strcuture determination of the periplasmic domain of exbd from2 e.coli 16 c2ipcB_ 53.1 29 PDB header:transport protein Chain: B: PDB Molecule:preprotein translocase seca subunit; PDBTitle: crystal structure of the translocation atpase seca from thermus2 thermophilus reveals a parallel, head-to-head dimer 17 d1zunb1 41.3 18 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 18 c3l7nA_ 40.1 8 PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of smu.1228c 19 d1g2qa_ 37.6 13 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 20 d1o57a2 37.1 13 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 21 d1n0ua1 not modelled 36.8 33 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 22 c2jwlB_ not modelled 33.3 6 PDB header:membrane protein Chain: B: PDB Molecule:protein tolr; PDBTitle: solution structure of periplasmic domain of tolr from h.2 influenzae with saxs data 23 c3k4iC_ not modelled 31.0 20 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein pspto_3204 from2 pseudomonas syringae pv. tomato str. dc3000 24 d2bv3a1 not modelled 27.3 21 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 25 d1jnya1 not modelled 26.4 15 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 26 c2i5kB_ not modelled 26.3 19 PDB header:transferase Chain: B: PDB Molecule:utp--glucose-1-phosphate uridylyltransferase; PDBTitle: crystal structure of ugp1p 27 d1o1ya_ not modelled 24.1 10 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 28 c2zwaA_ not modelled 23.9 17 PDB header:transferase Chain: A: PDB Molecule:leucine carboxyl methyltransferase 2; PDBTitle: crystal structure of trna wybutosine synthesizing enzyme2 tyw4 29 c3cr8C_ not modelled 23.9 8 PDB header:transferase Chain: C: PDB Molecule:sulfate adenylyltranferase, adenylylsulfate PDBTitle: hexameric aps kinase from thiobacillus denitrificans 30 d1l1qa_ not modelled 22.4 12 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 31 d1qb7a_ not modelled 21.9 15 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 32 d2f69a1 not modelled 21.4 29 Fold:open-sided beta-meander Superfamily:Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Family:Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 33 d1f60a1 not modelled 20.0 12 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 34 c2idcA_ not modelled 19.9 17 PDB header:replication/chaperone Chain: A: PDB Molecule:anti-silencing protein 1 and histone h3 chimera; PDBTitle: structure of the histone h3-asf1 chaperone interaction 35 d1roca_ not modelled 18.8 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:ASF1-like Family:ASF1-like 36 d2icya1 not modelled 17.9 24 Fold:Single-stranded left-handed beta-helix Superfamily:Trimeric LpxA-like enzymes Family:GlmU C-terminal domain-like 37 c2i32A_ not modelled 17.8 22 PDB header:replication chaperone Chain: A: PDB Molecule:anti-silencing factor 1 paralog a; PDBTitle: structure of a human asf1a-hira complex and insights into2 specificity of histone chaperone complex assembly 38 d2i32a1 not modelled 17.8 22 Fold:Immunoglobulin-like beta-sandwich Superfamily:ASF1-like Family:ASF1-like 39 d2c78a1 not modelled 16.7 10 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 40 d1v30a_ not modelled 16.6 56 Fold:Gamma-glutamyl cyclotransferase-like Superfamily:Gamma-glutamyl cyclotransferase-like Family:Gamma-glutamyl cyclotransferase-like 41 c3es1A_ not modelled 16.6 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of protein with a cupin-like fold and unknown2 function (yp_001165807.1) from novosphingobium aromaticivorans dsm3 12444 at 1.91 a resolution 42 d1mvfd_ not modelled 16.6 22 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 43 d2exda1 not modelled 16.6 18 Fold:OB-fold Superfamily:NfeD domain-like Family:NfeD domain-like 44 c3agqA_ not modelled 16.5 9 PDB header:translation,transferase Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q PDBTitle: structure of viral polymerase form ii 45 c3tr5C_ not modelled 16.4 18 PDB header:translation Chain: C: PDB Molecule:peptide chain release factor 3; PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii 46 d2cu9a1 not modelled 16.1 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:ASF1-like Family:ASF1-like 47 c2eqaA_ not modelled 14.7 18 PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein st1526; PDBTitle: crystal structure of the hypothetical sua5 protein from2 sulfolobus tokodaii 48 c3k13A_ not modelled 14.1 17 PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron 49 d1vkba_ not modelled 14.0 44 Fold:Gamma-glutamyl cyclotransferase-like Superfamily:Gamma-glutamyl cyclotransferase-like Family:Gamma-glutamyl cyclotransferase-like 50 c2h5eB_ not modelled 13.7 16 PDB header:translation Chain: B: PDB Molecule:peptide chain release factor rf-3; PDBTitle: crystal structure of e.coli polypeptide release factor rf3 51 d1q1oa_ not modelled 13.5 10 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain 52 c2wmkB_ not modelled 13.3 14 PDB header:hydrolase Chain: B: PDB Molecule:fucolectin-related protein; PDBTitle: crystal structure of the catalytic module of a family 982 glycoside hydrolase from streptococcus pneumoniae sp3-bs713 (sp3gh98) in complex with the a-lewisy pentasaccharide4 blood group antigen. 53 c2xexA_ not modelled 13.1 13 PDB header:translation Chain: A: PDB Molecule:elongation factor g; PDBTitle: crystal structure of staphylococcus aureus elongation factor2 g 54 d1dcsa_ not modelled 13.0 16 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Penicillin synthase-like 55 c3mezA_ not modelled 12.7 15 PDB header:sugar binding protein Chain: A: PDB Molecule:mannose-specific lectin 3 chain 1; PDBTitle: x-ray structural analysis of a mannose specific lectin from dutch2 crocus (crocus vernus) 56 c2kl8A_ not modelled 12.2 23 PDB header:de novo protein Chain: A: PDB Molecule:or15; PDBTitle: solution nmr structure of de novo designed ferredoxin-like2 fold protein, northeast structural genomics consortium3 target or15 57 d1iqoa_ not modelled 12.2 21 Fold:Hypothetical protein MTH1880 Superfamily:Hypothetical protein MTH1880 Family:Hypothetical protein MTH1880 58 d1pqsa_ not modelled 11.8 8 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain 59 c3l83A_ not modelled 11.7 15 PDB header:transferase Chain: A: PDB Molecule:glutamine amido transferase; PDBTitle: crystal structure of glutamine amido transferase from methylobacillus2 flagellatus 60 c3jubA_ not modelled 11.3 38 PDB header:transferase Chain: A: PDB Molecule:aig2-like domain-containing protein 1; PDBTitle: human gamma-glutamylamine cyclotransferase 61 d1omwa2 not modelled 11.1 15 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain) 62 c2rdo7_ not modelled 10.8 13 PDB header:ribosome Chain: 7: PDB Molecule:elongation factor g; PDBTitle: 50s subunit with ef-g(gdpnp) and rrf bound 63 c2k5hA_ not modelled 10.5 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: solution nmr structure of protein encoded by mth693 from2 methanobacterium thermoautotrophicum: northeast structural3 genomics consortium target tt824a 64 d1vm6a3 not modelled 10.2 21 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 65 c3uotB_ not modelled 10.0 13 PDB header:cell cycle Chain: B: PDB Molecule:mediator of dna damage checkpoint protein 1; PDBTitle: crystal structure of mdc1 fha domain in complex with a phosphorylated2 peptide from the mdc1 n-terminus 66 c3cb4D_ not modelled 10.0 14 PDB header:translation Chain: D: PDB Molecule:gtp-binding protein lepa; PDBTitle: the crystal structure of lepa 67 d1xhsa_ not modelled 10.0 56 Fold:Gamma-glutamyl cyclotransferase-like Superfamily:Gamma-glutamyl cyclotransferase-like Family:Gamma-glutamyl cyclotransferase-like 68 c2g0qA_ not modelled 9.8 44 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:at5g39720.1 protein; PDBTitle: solution structure of at5g39720.1 from arabidopsis thaliana 69 c2vu9A_ not modelled 9.6 16 PDB header:hydrolase Chain: A: PDB Molecule:botulinum neurotoxin a heavy chain; PDBTitle: crystal structure of botulinum neurotoxin serotype a2 binding domain in complex with gt1b 70 c2bm0A_ not modelled 9.5 15 PDB header:elongation factor Chain: A: PDB Molecule:elongation factor g; PDBTitle: ribosomal elongation factor g (ef-g) fusidic acid resistant2 mutant t84a 71 c1qysA_ not modelled 9.4 21 PDB header:de novo protein Chain: A: PDB Molecule:top7; PDBTitle: crystal structure of top7: a computationally designed2 protein with a novel fold 72 d1od5a2 not modelled 9.2 21 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 73 d2cvoa2 not modelled 9.1 16 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:GAPDH-like 74 c3k3sG_ not modelled 8.9 17 PDB header:hydrolase Chain: G: PDB Molecule:altronate hydrolase; PDBTitle: crystal structure of altronate hydrolase (fragment 1-84) from shigella2 flexneri. 75 c2q4jB_ not modelled 8.9 16 PDB header:transferase Chain: B: PDB Molecule:probable utp-glucose-1-phosphate uridylyltransferase 2; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at3g03250, a putative udp-glucose3 pyrophosphorylase 76 c2jqvA_ not modelled 8.8 44 PDB header:structural genomics Chain: A: PDB Molecule:aig2 protein-like; PDBTitle: solution structure at3g28950.1 from arabidopsis thaliana 77 c3cgiD_ not modelled 8.8 36 PDB header:unknown function Chain: D: PDB Molecule:propanediol utilization protein pduu; PDBTitle: crystal structure of the pduu shell protein from the pdu2 microcompartment 78 c3mmyE_ not modelled 8.8 16 PDB header:nuclear protein Chain: E: PDB Molecule:mrna export factor; PDBTitle: structural and functional analysis of the interaction between the2 nucleoporin nup98 and the mrna export factor rae1 79 d1ip9a_ not modelled 8.7 9 Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain 80 c2d5nB_ not modelled 8.7 18 PDB header:hydrolase, oxidoreductase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: crystal structure of a bifunctional deaminase and reductase2 involved in riboflavin biosynthesis 81 c2qikA_ not modelled 8.7 50 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0131 protein ykqa; PDBTitle: crystal structure of ykqa from bacillus subtilis. northeast2 structural genomics target sr631 82 d1ofda1 not modelled 8.7 14 Fold:Single-stranded right-handed beta-helix Superfamily:Alpha subunit of glutamate synthase, C-terminal domain Family:Alpha subunit of glutamate synthase, C-terminal domain 83 c2jvfA_ not modelled 8.7 18 PDB header:de novo protein Chain: A: PDB Molecule:de novo protein m7; PDBTitle: solution structure of m7, a computationally-designed2 artificial protein 84 c2glvA_ not modelled 8.6 15 PDB header:lyase Chain: A: PDB Molecule:(3r)-hydroxymyristoyl-acyl carrier protein PDBTitle: crystal structure of (3r)-hydroxyacyl-acyl carrier protein2 dehydratase(fabz) mutant(y100a) from helicobacter pylori 85 c3r0eC_ not modelled 8.5 36 PDB header:sugar binding protein Chain: C: PDB Molecule:lectin; PDBTitle: structure of remusatia vivipara lectin 86 c2qv3A_ not modelled 8.2 57 PDB header:toxin Chain: A: PDB Molecule:vacuolating cytotoxin; PDBTitle: crystal structure of the helicobacter pylori vacuolating toxin p552 domain 87 d2dy1a1 not modelled 7.7 16 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 88 c3b8hA_ not modelled 7.7 24 PDB header:biosynthetic protein/transferase Chain: A: PDB Molecule:elongation factor 2; PDBTitle: structure of the eef2-exoa(e546a)-nad+ complex 89 c3ia0c_ not modelled 7.6 27 PDB header:structural protein Chain: C: PDB Molecule:ethanolamine utilization protein euts; PDBTitle: ethanolamine utilization microcompartment shell subunit,2 euts-g39v mutant 90 c2jw5A_ not modelled 7.5 12 PDB header:protein binding Chain: A: PDB Molecule:dna polymerase lambda; PDBTitle: polymerase lambda brct domain 91 d1y13a_ not modelled 7.5 19 Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:6-pyruvoyl tetrahydropterin synthase 92 c3jx9B_ not modelled 7.4 18 PDB header:isomerase Chain: B: PDB Molecule:putative phosphoheptose isomerase; PDBTitle: crystal structure of putative phosphoheptose isomerase2 (yp_001815198.1) from exiguobacterium sp. 255-15 at 1.95 a resolution 93 c1g2cN_ not modelled 7.4 22 PDB header:viral protein Chain: N: PDB Molecule:fusion protein (f); PDBTitle: human respiratory syncytial virus fusion protein core 94 d2gsaa_ not modelled 7.4 3 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 95 c2w18A_ not modelled 7.1 30 PDB header:nuclear protein Chain: A: PDB Molecule:partner and localizer of brca2; PDBTitle: crystal structure of the c-terminal wd40 domain of human2 palb2 96 d1diha1 not modelled 7.1 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 97 d1d9ea_ not modelled 7.0 9 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase 98 c3mkqA_ not modelled 7.0 9 PDB header:transport protein Chain: A: PDB Molecule:coatomer beta'-subunit; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat 99 d1fxza2 not modelled 7.0 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein