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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2vu9A_

Fold library idPDB HeaderMoleculeTitle
c2vu9A_PDB header: hydrolaseChain: A: PDB Molecule: botulinum neurotoxin a heavy chain;PDBTitle: crystal structure of botulinum neurotoxin serotype a2 binding domain in complex with gt1b


Added to library: Tue Mar 16 12:24:39 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMDTSILNLRYESNHLIDLSRYASKINIGSKVNFDPIDKNQIQLFNLESSKIEVILKNAIVYNSMYENFS
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Known secondary structure (DSSP)



TT
STT


TT
SS
TT
SSTT



GGGS
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence TSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYIN
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Known secondary structure (DSSP)




SGGGTT

TTTT
TTS


SBSSS
SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RWIFVTITNNRLNNSKIYINGRLIDQKPISNLGNIHASNNIMFKLDGCRDTHRYIWIKYFNLFDKELNEK
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Known secondary structure (DSSP) S

TTSTT
TT




SS


TT
SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence EIKDLYDNQSNSGILKDFWGDYLQYDKPYYMLNLYDPNKYVDVNNVGIRGYMYLKGPRGSVMTTNIYLNS
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Known secondary structure (DSSP)

SB
B
TTSSB
BTT

BSS
TT

SSTT




TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLYRGTKFIIKKYASGNKDNIVRNNDRVYINVVVKNKEYRLATNASQAGVEKILSALEIPDVGNLSQVVV
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Known secondary structure (DSSP)

S
S

SS


SS
B
BTT
SSS
B
TTSSSS


GGG
TTSB
 .........360.........370.........380.........390.........400.........410.........420
Sequence MKSKNDQGITNKCKMNLQDNNGNDIGFIGFHQFNNIAKLVASNWYNRQIERSSRTLGCSWEFIPVDDGWG
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Known secondary structure (DSSP)


SSSTT

TTS
TTTS
TTSGGGSTT



TTT
 .....
Sequence ERPLQ
Predicted secondary structure




SS confidence




Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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