Fold library entry viewer: c1nl3B_

Added to library: Tue Mar 16 11:58:40 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	S	P	D	L	G	T	L	V	P	R	G	S	M	A	D	I	L	S	K	L	L	R	L	G	E	G	R	M	V	K	R	L	K	K	V	A	D	Y	V	G	T	L	S	D	D	V	E	K	L	T	D	A	E	L	R	A	K	T	D	E	F	K	R	R	L	A	D	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S	S			S							T	T	S	T	T	T	T																	T	T						T	S		T	T	T	T	T										T	T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	P	E	T	L	D	D	L	L	P	E	A	F	A	V	A	R	E	A	A	W	R	V	L	D	Q	R	P	F	D	V	Q	V	M	G	A	A	A	L	H	L	G	N	V	A	E	M	K	T	G	E	G	K	T	L	T	C	V	L	P	A	Y	L	N	A	L	A	G	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																								S																T	T							T	T	S						T									T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	H	I	V	T	V	N	D	Y	L	A	K	R	D	S	E	W	M	G	R	V	H	R	F	L	G	L	Q	V	G	V	I	L	A	T	M	T	P	D	E	R	R	V	A	Y	N	A	D	I	T	Y	G	T	N	N	E	F	G	F	D	Y	L	R	D	N	M	A	H	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S																		T	T								T	T												S	S																	T	T		S	S	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	D	L	V	Q	R	G	H	H	Y	A	I	V	D	E	V	D	S	I	L	I	D	E	A	R	T	P	L	I	I	S	G	P	A	D	G	A	S	N	W	Y	T	E	F	A	R	L	A	P	L	M	E	K	D	V	H	Y	E	V	D	L	R	K	R	T	V	G	V	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T												T	T						T	G	G	G	G	S										S												G	G	G	S		B	T	T	T					T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	G	V	E	F	V	E	D	Q	L	G	I	D	N	L	Y	E	A	A	N	S	P	L	V	S	Y	L	N	N	A	L	K	A	K	E	L	F	S	R	D	K	D	Y	I	V	R	D	G	E	V	L	I	V	D	E	F	T	G	R	V	L	I	G	R	R	Y	N	E	G	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S		T	T		S	T	T																			B	T	T	T				S	S	S					B		S	S	S			B		T	T				S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	Q	A	I	E	A	K	E	H	V	E	I	K	A	E	N	Q	T	L	A	T	I	T	L	Q	N	Y	F	R	L	Y	D	K	L	A	G	M	T	G	T	A	Q	T	E	A	A	E	L	H	E	I	Y	K	L	G	V	V	S	I	P	T	N	M	P	M	I	R	E	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T																				T	T		S							S			G	G	G																		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	D	L	I	Y	K	T	E	E	A	K	Y	I	A	V	V	D	D	V	A	E	R	Y	A	K	G	Q	P	V	L	I	G	T	T	S	V	E	R	S	E	Y	L	S	R	Q	F	T	K	R	R	I	P	H	N	V	L	N	A	K	Y	H	E	Q	E	A	T	I	I	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S																			T								S														T	T	T								S	S	S										T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	G	R	R	G	G	V	T	V	A	T	N	M	A	G	R	G	T	D	I	V	L	G	G	N	V	D	F	L	T	D	Q	R	L	R	E	R	G	L	D	P	V	E	T	P	E	E	Y	E	A	A	W	H	S	E	L	P	I	V	K	E	E	A	S	K	E	A	K	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	T	T							T	T		S	T	T	S				T	T														T	T			T	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	E	A	G	G	L	Y	V	L	G	T	E	R	H	E	S	R	R	I	D	N	Q	L	R	G	R	S	G	R	Q	G	D	P	G	E	S	R	F	Y	L	S	L	G	D	E	L	M	R	R	F	N	G	A	A	L	E	T	L	L	T	R	L	N	L	P	D	D	V	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S						S	S			S	S									T	T	S	S	G	G	G											T	T	S					T	T	T											T	T			T	T	S		B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	A	K	M	V	T	R	A	I	K	S	A	Q	T	Q	V	E	Q	Q	N	F	E	V	R	K	N	V	L	K	Y	D	E	V	M	N	Q	Q	R	K	V	I	Y	A	E	R	R	R	I	L	E	G	E	N	L	K	D	Q	A	L	D	M	V	R	D	V	I	T	A	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																			T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	D	G	A	T	G	E	G	Y	A	E	D	W	D	L	D	A	L	W	T	A	L	K	T	L	Y	P	V	G	I	T	A	D	S	L	T	E	E	L	L	E	A	L	L	K	D	A	E	R	A	Y	A	A	R	E	A	E	L	E	E	I	A	G	E	G	A	M	R	Q	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			S	T	T	S													S				S		T	G	G	G			T																										S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.
Sequence	R	N	V	L	L	N	V	I	D	R	K	W	R	E	H	L	Y	E	M	D	Y	L	K	E	G	I	G	L	R	A	M	A	Q	R	D	P	L	V	E	Y	Q	R	E	G	Y	D	M	F	M	A	M	L	D	G	M	K	E	E	S	V	G	F	L	F	N	V	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											T	T	S			S	S

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PDB structure

FASTA sequence

Hidden Markov model

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