Fold library entry viewer: c3b8hA_

Added to library: Tue Mar 16 13:29:12 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	A	F	T	V	D	Q	M	R	S	L	M	D	K	V	T	N	V	R	N	M	S	V	I	A	H	V	D	H	G	K	S	T	L	T	D	S	L	V	Q	R	A	G	I	I	S	A	G	I	T	I	K	S	T	A	I	S	L	Y	S	E	M	S	D	E	D	V	K	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S		G	G	G										G	G	G	T													B								B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	Q	K	T	D	G	N	S	F	L	I	N	L	I	D	S	P	G	H	V	D	F	S	S	E	V	T	A	A	L	R	V	T	D	G	A	L	V	V	V	D	T	I	E	G	V	C	V	Q	T	E	T	V	L	R	Q	A	L	G	E	R	I	K	P	V	V	V	I	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S				S	S											S	S	T	T											T		S								T	T	T	B	S														T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	D	R	A	L	L	E	L	Q	V	S	K	E	D	L	Y	Q	T	F	A	R	T	V	E	S	V	N	V	I	V	S	T	Y	A	D	E	V	L	G	D	V	Q	V	Y	P	A	R	G	T	V	A	F	G	S	G	L	H	G	W	A	F	T	I	R	Q	F	A	T	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S																										S		G	G	G							G	G	G	T							T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	K	K	F	G	V	D	K	A	K	M	M	D	R	L	W	G	D	S	F	F	N	P	K	T	K	K	W	T	N	K	D	T	D	A	E	G	K	P	L	E	R	A	F	N	M	F	I	L	D	P	I	F	R	L	F	T	A	I	M	N	F	K	K	D	E	I	P	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T										S	S	S	S					T	T	T	T				S		S	B		T	T	S		B			B						T													T	T		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	E	K	L	E	I	V	L	K	G	D	E	K	D	L	E	G	K	A	L	L	K	V	V	M	R	K	F	L	P	A	A	D	A	L	L	E	M	I	V	L	H	L	P	S	P	V	T	A	Q	A	Y	R	A	E	Q	L	Y	E	G	P	A	D	D	A	N	C	I	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T					G	G	G	G	G															S	B													S															B	S	S		T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	N	C	D	P	K	A	D	L	M	L	Y	V	S	K	M	V	P	T	S	D	K	G	R	F	Y	A	F	G	R	V	F	A	G	T	V	K	S	G	Q	K	V	R	I	Q	G	P	N	Y	V	P	G	K	K	D	D	L	F	I	K	A	I	Q	R	V	V	L	M	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		S	S	S	S											B	S	S	T	T											S				T	T								T	T			S	S	S		T	T							S							T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	F	V	E	P	I	D	D	C	P	A	G	N	I	I	G	L	V	G	I	D	Q	F	L	L	K	T	G	T	L	T	T	S	E	T	A	H	N	M	K	V	M	K	F	S	V	S	P	V	V	Q	V	A	V	E	V	K	N	A	N	D	L	P	K	L	V	E	G	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						S				T	T							S		T	T	T		S	S						S		T	T				B	S																	S	S	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	L	S	K	S	D	P	C	V	L	T	Y	M	S	E	S	G	E	H	I	V	A	G	T	G	E	L	H	L	E	I	C	L	Q	D	L	E	H	D	H	A	G	V	P	L	K	I	S	P	P	V	V	A	Y	R	E	T	V	E	S	E	S	S	Q	T	A	L	S	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T							T	T								S	S														T	T	S		S																S	S			S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	N	K	H	N	R	I	Y	L	K	A	E	P	I	D	E	E	V	S	L	A	I	E	N	G	I	I	N	P	R	D	D	F	K	A	R	A	R	I	M	A	D	D	Y	G	W	D	V	T	D	A	R	K	I	W	C	F	G	P	D	G	N	G	P	N	L	V	I	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S																					T	T	S	S		T	T	S																					T	T						S	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	K	A	V	Q	Y	L	H	E	I	K	D	S	V	V	A	A	F	Q	W	A	T	K	E	G	P	I	F	G	E	E	M	R	S	V	R	V	N	I	L	D	V	T	L	H	A	D	A	I	R	G	G	G	Q	I	I	P	T	M	R	R	A	T	Y	A	G	F	L	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T	G	G	G	G														S		T	T	T	S					S												S	S																							S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	D	P	K	I	Q	E	P	V	F	L	V	E	I	Q	C	P	E	Q	A	V	G	G	I	Y	S	V	L	N	K	K	R	G	Q	V	V	S	E	E	Q	R	P	G	T	P	L	F	T	V	K	A	Y	L	P	V	N	E	S	F	G	F	T	G	E	L	R	Q	A	T	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	G	G	G									T	T	T	T										S	S	S	S										G	G	G		T	T									T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.
Sequence	Q	A	F	P	Q	M	V	F	D	H	W	S	T	L	G	S	D	P	L	D	P	T	S	K	A	G	E	I	V	L	A	A	R	K	R	H	G	M	K	E	E	V	P	G	W	Q	E	Y	Y	D	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B												S	S		T	T		T	T	S														T			S	S								S

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PDB structure

FASTA sequence

Hidden Markov model

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