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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3b8hA_

Fold library idPDB HeaderMoleculeTitle
c3b8hA_PDB header: biosynthetic protein/transferaseChain: A: PDB Molecule: elongation factor 2;PDBTitle: structure of the eef2-exoa(e546a)-nad+ complex


Added to library: Tue Mar 16 13:29:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VAFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAGITIKSTAISLYSEMSDEDVKEI
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Known secondary structure (DSSP)

TTS
GGG

GGGTB




B





 .........80.........90.........100.........110.........120.........130.........140
Sequence KQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINK
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Known secondary structure (DSSP) SS


SS


SSTT
T
STTTBS
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VDRALLELQVSKEDLYQTFARTVESVNVIVSTYADEVLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRY
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Known secondary structure (DSSP) TS


S
GGG





GGGT
TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AKKFGVDKAKMMDRLWGDSFFNPKTKKWTNKDTDAEGKPLERAFNMFILDPIFRLFTAIMNFKKDEIPVL
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Known secondary structure (DSSP) TTTTT

SSSS
TTTTS
SB
TTS
B

BTTT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LEKLEIVLKGDEKDLEGKALLKVVMRKFLPAADALLEMIVLHLPSPVTAQAYRAEQLYEGPADDANCIAI
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Known secondary structure (DSSP) TT



GGGGG

SBS

BSS
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KNCDPKADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQGPNYVPGKKDDLFIKAIQRVVLMMG
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Known secondary structure (DSSP) TT
SSSS
BSSTT
STT

TT

SSS
TT
ST
 .........430.........440.........450.........460.........470.........480.........490
Sequence RFVEPIDDCPAGNIIGLVGIDQFLLKTGTLTTSETAHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLK
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Known secondary structure (DSSP) TSTT
S
TTT
SS
S
TT


BS








SSTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence RLSKSDPCVLTYMSESGEHIVAGTGELHLEICLQDLEHDHAGVPLKISPPVVAYRETVESESSQTALSKS
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Known secondary structure (DSSP)
TT

TT

SSTTS
S





SS

SS

 .........570.........580.........590.........600.........610.........620.........630
Sequence PNKHNRIYLKAEPIDEEVSLAIENGIINPRDDFKARARIMADDYGWDVTDARKIWCFGPDGNGPNLVIDQ
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Known secondary structure (DSSP) TTS



TTSS
TTS



TT
STTTSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence TKAVQYLHEIKDSVVAAFQWATKEGPIFGEEMRSVRVNILDVTLHADAIRGGGQIIPTMRRATYAGFLLA
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Known secondary structure (DSSP)
SS
TTGGGGS
TTTS

S

SS



S
 .........710.........720.........730.........740.........750.........760.........770
Sequence DPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGG
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Known secondary structure (DSSP)
GGGTTTT

SSSSGGG
TTTTT
 .........780.........790.........800.........810.........820..
Sequence QAFPQMVFDHWSTLGSDPLDPTSKAGEIVLAARKRHGMKEEVPGWQEYYDKL
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Known secondary structure (DSSP)

B


SS
TT
TTST

SS


S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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