Fold library entry viewer: c3mkqA_

Added to library: Sun Aug 29 00:20:05 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	L	D	I	K	K	T	F	S	N	R	S	D	R	V	K	G	I	D	F	H	P	T	E	P	W	V	L	T	T	L	Y	S	G	R	V	E	I	W	N	Y	E	T	Q	V	E	V	R	S	I	Q	V	T	E	T	P	V	R	A	G	K	F	I	A	R	K	N	W	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S									S	S	S	S							T	T	S							T	T	T	T										S	S									G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	G	S	D	D	F	R	I	R	V	F	N	Y	N	T	G	E	K	V	V	D	F	E	A	H	P	D	Y	I	R	S	I	A	V	H	P	T	K	P	Y	V	L	S	G	S	D	D	L	T	V	K	L	W	N	W	E	N	N	W	A	L	E	Q	T	F	E	G	H	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S							T	T	T											S	S									S	S	S	S							T	T	S							G	G	G	T	S										S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	V	M	C	V	A	F	N	P	K	D	P	S	T	F	A	S	G	C	L	D	R	T	V	K	V	W	S	L	G	Q	S	T	P	N	F	T	L	T	T	G	Q	E	R	G	V	N	Y	V	D	Y	Y	P	L	P	D	K	P	Y	M	I	T	A	S	D	D	L	T	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T										T	T	S							T	T		S	S		S								T	T										S	T	T									T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	W	D	Y	Q	T	K	S	C	V	A	T	L	E	G	H	M	S	N	V	S	F	A	V	F	H	P	T	L	P	I	I	I	S	G	S	E	D	G	T	L	K	I	W	N	S	S	T	Y	K	V	E	K	T	L	N	V	G	L	E	R	S	W	C	I	A	T	H	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T										S	S									S	S	S	S							T	T	S							T	T	T		S								S	S	S	S								T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	R	K	N	Y	I	A	S	G	F	D	N	G	F	T	V	L	S	L	G	N	D	E	P	T	L	S	L	D	P	V	G	K	L	V	W	S	G	G	K	N	A	A	A	S	D	I	F	T	A	V	I	R	G	N	E	E	V	E	Q	D	E	P	L	S	L	Q	T	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G							T	T								S			S							S	S	S								T	T	S		T	T									S						S	S	S		B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	G	S	V	D	V	F	P	Q	S	L	A	H	S	P	N	G	R	F	V	T	V	V	G	D	G	E	Y	V	I	Y	T	A	L	A	W	R	N	K	A	F	G	K	C	Q	D	F	V	W	G	P	D	S	N	S	Y	A	L	I	D	E	T	G	Q	I	K	Y	Y	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			S						T	T	S	S							T	T							T	T	T	T									S						T	T	S	S							T	T								T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	K	E	V	T	S	W	S	V	P	M	H	S	A	I	D	R	L	F	S	G	A	L	L	G	V	K	S	D	G	F	V	Y	F	F	D	W	D	N	G	T	L	V	R	R	I	D	V	N	A	K	D	V	I	W	S	D	N	G	E	L	V	M	I	V	N	T	N	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				T	T						S	S								S	S	S						T	T							T	T	T								S	S									T	T	S	S										S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	D	E	A	S	G	Y	T	L	L	F	N	K	D	A	Y	L	E	A	A	N	N	G	N	I	D	D	S	E	G	V	D	E	A	F	D	V	L	Y	E	L	S	E	S	I	T	S	G	K	W	V	G	D	V	F	I	F	T	T	A	T	N	R	L	N	Y	F	V	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S		S																		T			B	T	T	T	B		T	T	T									S			S						T	T							T	T	S							T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	T	Y	N	L	A	H	Y	T	K	E	M	Y	L	L	G	Y	L	A	R	D	N	K	V	Y	L	A	D	R	E	V	H	V	Y	G	Y	E	I	S	L	E	V	L	E	F	Q	T	L	T	L	R	G	E	I	E	E	A	I	E	N	V	L	P	N	V	E	G	K	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S									G	G	G	T							T	T																					T	T									T	G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	T	K	I	A	R	F	L	E	G	Q	E	Y	Y	E	E	A	L	N	I	S	P	D	Q	D	Q	K	F	E	L	A	L	K	V	G	Q	L	T	L	A	R	D	L	L	T	D	E	S	A	E	M	K	W	R	A	L	G	D	A	S	L	Q	R	F	N	F	K	L	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																							T										T	T																	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	A	F	T	N	A	H	D	L	E	S	L	F	L	L	H	S	S	F	N	N	K	E	G	L	V	T	L	A	K	D	A	E	T	T	G	K	F	N	L	A	F	N	A	Y	W	I	A	G	D	I	Q	G	A	K	D	L	L	I	K	S	Q	R	F	S	E	A	A	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T												T	T															T	T													T												T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.
Sequence	G	S	T	Y	G	L	G	D	N	E	V	N	D	I	V	T	K	W	K	E	N	L	I	L	N	G	K	N	T	V	S	E	R	V	C	G	A	E	G	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T																			T	T	T						T	T				G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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