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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2fsgA_

Fold library idPDB HeaderMoleculeTitle
c2fsgA_PDB header: protein transportChain: A: PDB Molecule: preprotein translocase seca subunit;PDBTitle: complex seca:atp from escherichia coli


Added to library: Tue Mar 16 13:55:11 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RTLRRXRKVVNIINAXEPEXEKLSDEELKGKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGXRHFD
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Known secondary structure (DSSP)
TS
TT

GGGGS



 .........80.........90.........100.........110.........120.........130.........140
Sequence VQLLGGXVLNERCIAEXRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVG
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Known secondary structure (DSSP) TTSS

TTS
TTTSS

SSTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence INLPGXPAPAKREAYAADITYGTNNEYGFDYLRDNXAFSPEERVQRKLHYALVDEVDSILIDEARTPLII
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Known secondary structure (DSSP)

TT

SSTT
SSGGG






S
TTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGPNQTLASITFQNYFRLYEKLAGXTGTADTEAFEFSSIYKLDTVVVPTNRPXIRKDLPDLVYXTEAEKI
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Known secondary structure (DSSP)

TTSS
S








SS






SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATN
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Known secondary structure (DSSP) TT

SSTT




TT
TTTSTT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence XAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRS
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Known secondary structure (DSSP)

TT




TT

STT
SS

TTTSSS

SSTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GRQGDAGSSRFYLSXEDALXRIFASDRVSGXXRKLGXKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQL
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Known secondary structure (DSSP) SGGG

TTSGGGGGGS
TTGGGG


TT




 .........500.........510.........520.........530.........540.........550.........560
Sequence LEYDDVANDQRRAIYSQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEXWDIPGLQERLKNDFD
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Known secondary structure (DSSP) T
S

TTS
TT

GGG


 .........570.........580.........590.........600.........610.........620.........630
Sequence LDLPIAEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEXXRHFEKGVXLQTLDSLWKEHLAAXDYL
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Known secondary structure (DSSP)




SS


 .........640.........650.........660.........670.........
Sequence RQGIHLRGYAQKDPKQEYKRESFSXFAAXLESLKYEVISTLSKVQVRXP
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Known secondary structure (DSSP) TTTTSS
SSS
TTT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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