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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2wmkB_

Fold library idPDB HeaderMoleculeTitle
c2wmkB_PDB header: hydrolaseChain: B: PDB Molecule: fucolectin-related protein;PDBTitle: crystal structure of the catalytic module of a family 982 glycoside hydrolase from streptococcus pneumoniae sp3-bs713 (sp3gh98) in complex with the a-lewisy pentasaccharide4 blood group antigen.


Added to library: Sat Aug 28 16:49:03 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence VDKRREINNEHPLLMMPLYANGEEFNQGKYTFWGGDTLTGKWENIPDDLKPYTVIQLHPDDLPKRDGAAR
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Known secondary structure (DSSP)


SS

BTTB
B
TTT


BTTS

S
TTTGGG
TTS
SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DFYEHMLEEAAKYVNPKTGKNEPIPVILTVYTAGNMPYYTSAHWLSTSWIDKMYQKYPNLHGIFSTANYW
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Known secondary structure (DSSP) T
TTTT



GGG
TTT
GGGG


TT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IWANDIENKAADYLKVSAKNGGYFIWAEQNNGSAIEKAFGKNGKIAFQKSVDKYWKNLIFMFKNTPAAEG
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Known secondary structure (DSSP) S

TTTT



GGGTTTTS

GGG


GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence NDSTTESYMKGLWLSNHTYQWGGLMDTWKWYETGKWKLFASGNIGKSQGDRQWLTEPESMLGEEALGVYL
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Known secondary structure (DSSP)
TTSSSTTTT

STT
SS


SS
TTTS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence NGGVVYNFEHPAYTYGVNNKESLLFSEVIKEFFRYVIAHPAPSKEKVLEDTKVFIHGDYSNKGNGKFFVN
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Known secondary structure (DSSP) TT

STTT
TS



T

S
GGGTTGGGGTBT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VNTDREQTPLYMTGRYNVIPAIPGVLKTDRIQIKEITSPEFSSTQARKEYLNKLYPMNYEGDIFAQKLDN
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Known secondary structure (DSSP) TTBSSSS
S

S

TT




TTS




TTSGGGSSS


SBSSSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence RWFVYNYKVNENVKQTGKLKFNSLEMNVEFEPHTYGIFERISNGLKVNLNNFRTNKDSLWSNAQDANQAK
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Known secondary structure (DSSP)


SSS


TT
SS
TT





GGGGTT
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence KLPQLTKKGAIKWIEEHYIKDTQFGEKRVTKIVLRGIDKLPTIHSLSGTNNSYDQPSLNFDQKNHMVTIT
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Known secondary structure (DSSP) TS



TSSS





S

S

STT
B


GGGT
 .........570...
Sequence INSNGNLEFELHF
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Known secondary structure (DSSP) SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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