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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3mmyE_

Fold library idPDB HeaderMoleculeTitle
c3mmyE_PDB header: nuclear proteinChain: E: PDB Molecule: mrna export factor;PDBTitle: structural and functional analysis of the interaction between the2 nucleoporin nup98 and the mrna export factor rae1


Added to library: Sun Aug 29 03:07:24 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FGTTSGFGTSGTSMFTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT
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 .........80.........90.........100.........110.........120.........130.........140
Sequence IPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTG
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TTSSTTSTTTT
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 .........150.........160.........170.........180.........190.........200.........210
Sequence SWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRC
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TTGGG

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 .........220.........230.........240.........250.........260.........270.........280
Sequence VAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNSAPQDIYAVNGIAFHPVHGTLATV
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 .........290.........300.........310.........320.........330.........340.........350
Sequence GSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEE
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Known secondary structure (DSSP) TTS
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GGG

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 ....
Sequence LKPR
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Known secondary structure (DSSP) TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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