Email l.a.kelley@imperial.ac.uk Description P69506 Date Thu Jan 5 12:11:46 GMT 2012 Unique Job ID a3c8380d748df140

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2p0nA_ 99.7 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein nmb1532; PDBTitle: nmb1532 protein from neisseria meningitidis, unknown function 2 c2k5eA_ 99.6 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of putative uncharacterized protein2 gsu1278 from methanocaldococcus jannaschii, northeast3 structural genomics consortium (nesg) target gsr195 3 c2k53A_ 99.5 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:a3dk08 protein; PDBTitle: nmr solution structure of a3dk08 protein from clostridium2 thermocellum: northeast structural genomics consortium3 target cmr9 4 c3caxA_ 98.5 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pf0695; PDBTitle: crystal structure of uncharacterized protein pf0695 5 d2fi0a1 97.3 14 Fold:SP0561-like Superfamily:SP0561-like Family:SP0561-like 6 c2awyB_ 93.9 14 PDB header:oxygen storage/transport Chain: B: PDB Molecule:hemerythrin-like domain protein dcrh; PDBTitle: met-dcrh-hr 7 d2mhra_ 72.7 17 Fold:Four-helical up-and-down bundle Superfamily:Hemerythrin-like Family:Hemerythrin-like 8 d2hmza_ 71.7 16 Fold:Four-helical up-and-down bundle Superfamily:Hemerythrin-like Family:Hemerythrin-like 9 d2pt0a1 70.7 16 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA 10 d1i4ya_ 67.2 14 Fold:Four-helical up-and-down bundle Superfamily:Hemerythrin-like Family:Hemerythrin-like 11 d1hrba_ 57.7 16 Fold:Four-helical up-and-down bundle Superfamily:Hemerythrin-like Family:Hemerythrin-like 12 d1qwga_ 50.4 23 Fold:TIM beta/alpha-barrel Superfamily:(2r)-phospho-3-sulfolactate synthase ComA Family:(2r)-phospho-3-sulfolactate synthase ComA 13 d1r9ja3 48.2 15 Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Transketolase C-terminal domain-like 14 d1ku7a_ 47.4 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 15 c3o8nA_ 39.7 27 PDB header:transferase Chain: A: PDB Molecule:6-phosphofructokinase, muscle type; PDBTitle: structure of phosphofructokinase from rabbit skeletal muscle 16 d1d4ca3 39.0 6 Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 17 c1u83A_ 38.5 16 PDB header:lyase Chain: A: PDB Molecule:phosphosulfolactate synthase; PDBTitle: psl synthase from bacillus subtilis 18 d1u83a_ 38.5 16 Fold:TIM beta/alpha-barrel Superfamily:(2r)-phospho-3-sulfolactate synthase ComA Family:(2r)-phospho-3-sulfolactate synthase ComA 19 c2higA_ 38.0 15 PDB header:transferase Chain: A: PDB Molecule:6-phospho-1-fructokinase; PDBTitle: crystal structure of phosphofructokinase apoenzyme from trypanosoma2 brucei. 20 d1sm4a2 36.9 34 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 21 c2lfcA_ not modelled 35.3 15 PDB header:oxidoreductase Chain: A: PDB Molecule:fumarate reductase, flavoprotein subunit; PDBTitle: solution nmr structure of fumarate reductase flavoprotein subunit from2 lactobacillus plantarum, northeast structural genomics consortium3 target lpr145j 22 d2p5zx2 not modelled 35.0 15 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like 23 d1y0pa3 not modelled 35.0 12 Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 24 d4pfka_ not modelled 31.6 15 Fold:Phosphofructokinase Superfamily:Phosphofructokinase Family:Phosphofructokinase 25 c3o8oB_ not modelled 30.5 23 PDB header:transferase Chain: B: PDB Molecule:6-phosphofructokinase subunit beta; PDBTitle: structure of phosphofructokinase from saccharomyces cerevisiae 26 c2p9jH_ not modelled 29.8 13 PDB header:structural genomics, unknown function Chain: H: PDB Molecule:hypothetical protein aq2171; PDBTitle: crystal structure of aq2171 from aquifex aeolicus 27 d2djia2 not modelled 29.8 13 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase Pyr module 28 d2phcb1 not modelled 29.4 15 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:PH0987 C-terminal domain-like 29 c3k2qA_ not modelled 29.3 27 PDB header:transferase Chain: A: PDB Molecule:pyrophosphate-dependent phosphofructokinase; PDBTitle: crystal structure of pyrophosphate-dependent2 phosphofructokinase from marinobacter aquaeolei, northeast3 structural genomics consortium target mqr88 30 c3o8oC_ not modelled 29.3 27 PDB header:transferase Chain: C: PDB Molecule:6-phosphofructokinase subunit alpha; PDBTitle: structure of phosphofructokinase from saccharomyces cerevisiae 31 d1pfka_ not modelled 29.1 20 Fold:Phosphofructokinase Superfamily:Phosphofructokinase Family:Phosphofructokinase 32 c1zxxA_ not modelled 28.7 19 PDB header:transferase Chain: A: PDB Molecule:6-phosphofructokinase; PDBTitle: the crystal structure of phosphofructokinase from lactobacillus2 delbrueckii 33 c2kebA_ not modelled 28.6 10 PDB header:dna binding protein Chain: A: PDB Molecule:dna polymerase subunit alpha b; PDBTitle: nmr solution structure of the n-terminal domain of the dna polymerase2 alpha p68 subunit 34 c2l1lB_ not modelled 27.8 16 PDB header:nuclear protein Chain: B: PDB Molecule:exportin-1; PDBTitle: nmr solution structure of the phi0 pki nes peptide in complex with2 crm1-rangtp 35 c1fncA_ not modelled 25.4 34 PDB header:oxidoreductase (nadp+(a),ferredoxin(a)) Chain: A: PDB Molecule:ferredoxin-nadp+ reductase; PDBTitle: refined crystal structure of spinach ferredoxin reductase2 at 1.7 angstroms resolution: oxidized, reduced, and 2'-3 phospho-5'-amp bound states 36 c2p5zX_ not modelled 23.7 15 PDB header:structural genomics, unknown function Chain: X: PDB Molecule:type vi secretion system component; PDBTitle: the e. coli c3393 protein is a component of the type vi secretion2 system and exhibits structural similarity to t4 bacteriophage tail3 proteins gp27 and gp5 37 c3opyH_ not modelled 23.0 29 PDB header:transferase Chain: H: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 38 c3n1uA_ not modelled 22.6 5 PDB header:hydrolase Chain: A: PDB Molecule:hydrolase, had superfamily, subfamily iii a; PDBTitle: structure of putative had superfamily (subfamily iii a) hydrolase from2 legionella pneumophila 39 c3opyB_ not modelled 22.1 29 PDB header:transferase Chain: B: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 40 d1ffva1 not modelled 22.0 18 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 41 d1zxia1 not modelled 21.4 21 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 42 d1v97a1 not modelled 20.3 13 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 43 c3opyG_ not modelled 20.2 29 PDB header:transferase Chain: G: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 44 d2f48a1 not modelled 20.2 19 Fold:Phosphofructokinase Superfamily:Phosphofructokinase Family:Phosphofructokinase 45 d2al3a1 not modelled 19.8 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:UBX domain 46 c3g7pA_ not modelled 19.8 14 PDB header:unknown function Chain: A: PDB Molecule:nitrogen fixation protein; PDBTitle: crystal structure of a nifx-associated protein of unknown function2 (afe_1514) from acidithiobacillus ferrooxidans atcc at 2.00 a3 resolution 47 c3fiwB_ not modelled 19.7 20 PDB header:transcription regulator Chain: B: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: structure of sco0253, a tetr-family transcriptional regulator from2 streptomyces coelicolor 48 d2piaa3 not modelled 18.6 4 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 49 d1ozha2 not modelled 18.1 7 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase Pyr module 50 d3e9va1 not modelled 17.8 15 Fold:BTG domain-like Superfamily:BTG domain-like Family:BTG domain-like 51 d2z15a1 not modelled 17.6 18 Fold:BTG domain-like Superfamily:BTG domain-like Family:BTG domain-like 52 c3hl4B_ not modelled 17.3 8 PDB header:transferase Chain: B: PDB Molecule:choline-phosphate cytidylyltransferase a; PDBTitle: crystal structure of a mammalian ctp:phosphocholine2 cytidylyltransferase with cdp-choline 53 c2rrdA_ not modelled 17.1 14 PDB header:dna binding protein Chain: A: PDB Molecule:hrdc domain from bloom syndrome protein; PDBTitle: structure of hrdc domain from human bloom syndrome protein, blm 54 c2pmzN_ not modelled 16.7 14 PDB header:translation, transferase Chain: N: PDB Molecule:dna-directed rna polymerase subunit n; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 55 d1qo8a3 not modelled 16.4 12 Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 56 c3nj2B_ not modelled 16.4 9 PDB header:unknown function Chain: B: PDB Molecule:duf269-containing protein; PDBTitle: crystal structure of cce_0566 from the cyanobacterium cyanothece2 51142, a protein associated with nitrogen fixation from the duf2693 family 57 d1jt6a1 not modelled 16.1 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 58 d1d8ba_ not modelled 15.9 18 Fold:SAM domain-like Superfamily:HRDC-like Family:HRDC domain from helicases 59 c2zp2B_ not modelled 15.6 23 PDB header:transferase inhibitor Chain: B: PDB Molecule:kinase a inhibitor; PDBTitle: c-terminal domain of kipi from bacillus subtilis 60 d1n62a1 not modelled 15.5 18 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 61 d1wrua2 not modelled 14.9 26 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like 62 d1f3ta2 not modelled 14.9 11 Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain 63 d1nd9a_ not modelled 14.7 20 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:N-terminal subdomain of bacterial translation initiation factor IF2 64 c3m8jA_ not modelled 14.5 7 PDB header:transcription Chain: A: PDB Molecule:focb protein; PDBTitle: crystal structure of e.coli focb at 1.4 a resolution 65 c2xvcA_ not modelled 14.4 13 PDB header:cell cycle Chain: A: PDB Molecule:escrt-iii; PDBTitle: molecular and structural basis of escrt-iii recruitment to2 membranes during archaeal cell division 66 d2p7vb1 not modelled 14.4 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 67 c3opyE_ not modelled 14.3 27 PDB header:transferase Chain: E: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 68 c3b81A_ not modelled 14.0 13 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, acrr family; PDBTitle: crystal structure of predicted dna-binding transcriptional regulator2 of tetr/acrr family (np_350189.1) from clostridium acetobutylicum at3 2.10 a resolution 69 d1rm6c1 not modelled 14.0 13 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 70 c3he0A_ not modelled 13.6 13 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the structure of a putative transcriptional regulator tetr family2 protein from vibrio parahaemolyticus. 71 c2wuiA_ not modelled 13.6 20 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of mexz, a key repressor responsible for2 antibiotic resistance in pseudomonas aeruginosa. 72 c2nvaH_ not modelled 13.6 6 PDB header:lyase Chain: H: PDB Molecule:arginine decarboxylase, a207r protein; PDBTitle: the x-ray crystal structure of the paramecium bursaria2 chlorella virus arginine decarboxylase bound to agmatine 73 c2qwwB_ not modelled 13.5 10 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution 74 d1gaqb_ not modelled 13.4 9 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 75 d1pvda2 not modelled 13.3 18 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase Pyr module 76 d2i10a1 not modelled 13.1 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 77 c2b5oA_ not modelled 12.9 31 PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin--nadp reductase; PDBTitle: ferredoxin-nadp reductase 78 c1pfuA_ not modelled 12.9 15 PDB header:ligase Chain: A: PDB Molecule:methionyl-trna synthetase; PDBTitle: methionyl-trna synthetase from escherichia coli complexed2 with methionine phosphinate 79 c3ccyA_ not modelled 12.8 13 PDB header:transcription regulator Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator from2 bordetella parapertussis 12822 80 d1gawa2 not modelled 12.7 28 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 81 d1losc_ not modelled 12.7 10 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Decarboxylase 82 d2np5a1 not modelled 12.6 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 83 c3f6wE_ not modelled 12.5 13 PDB header:dna binding protein Chain: E: PDB Molecule:xre-family like protein; PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000 84 c2qcoA_ not modelled 12.5 17 PDB header:transcription Chain: A: PDB Molecule:cmer; PDBTitle: crystal structure of the transcriptional regulator cmer from2 campylobacter jejuni 85 d2cg4a1 not modelled 12.4 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 86 d3cdda2 not modelled 12.4 14 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like 87 d1oe8a1 not modelled 12.3 22 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Glutathione S-transferase (GST), C-terminal domain 88 d1h3na3 not modelled 12.3 13 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 89 d2fd5a1 not modelled 12.3 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 90 c3bcgA_ not modelled 12.2 20 PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator acrr; PDBTitle: conformational changes of the acrr regulator reveal a2 mechanism of induction 91 c2k29A_ not modelled 12.2 19 PDB header:transcription Chain: A: PDB Molecule:antitoxin relb; PDBTitle: structure of the dbd domain of e. coli antitoxin relb 92 c2kwpA_ not modelled 12.2 21 PDB header:transcription Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: solution structure of the aminoterminal domain of e. coli nusa 93 d2g7la1 not modelled 12.1 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 94 d1pb6a1 not modelled 12.1 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 95 c3nbmA_ not modelled 12.1 28 PDB header:transferase Chain: A: PDB Molecule:pts system, lactose-specific iibc components; PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae. 96 c1wygA_ not modelled 12.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s) 97 c2dg7A_ not modelled 12.0 23 PDB header:gene regulation Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of the putative transcriptional regulator sco03372 from streptomyces coelicolor a3(2) 98 d4fxca_ not modelled 11.9 22 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 99 d2id3a1 not modelled 11.9 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain