Fold library entry viewer: c3o8oB_

Added to library: Sat Feb 5 09:12:56 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	Q	K	A	I	A	V	M	T	S	G	G	D	A	P	G	M	N	S	N	V	R	A	I	V	R	S	A	I	F	K	G	C	R	A	F	V	V	M	E	G	Y	E	G	L	V	R	G	G	P	E	Y	I	K	E	F	H	W	E	D	V	R	G	W	S	A	E	G	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S			T	T																T							T	T							S		S	T	T	T						G	G	G	G	T	T	G	G	G			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	I	G	T	A	R	C	M	E	F	K	K	R	E	G	R	L	L	G	A	Q	H	L	I	E	A	G	V	D	A	L	I	V	C	G	G	D	G	S	L	T	G	A	D	L	F	R	S	E	W	P	S	L	I	E	E	L	L	K	T	N	R	I	S	N	E	Q	Y	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						S	G	G	G	S															T																																T	T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	K	H	L	N	I	C	G	T	V	G	S	I	D	N	D	M	S	T	T	D	A	T	I	G	A	Y	S	A	L	D	R	I	C	K	A	I	D	Y	V	E	A	T	A	N	S	H	S	R	A	F	V	V	E	V	M	G	R	N	C	G	W	L	A	L	L	A	G	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										B		T	T				T	T		S			B	T																						T	T										T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	S	A	D	Y	I	F	I	P	E	K	P	A	T	S	S	E	W	Q	D	Q	M	C	D	I	V	S	K	H	R	S	R	G	K	R	T	T	I	V	V	V	A	E	G	A	I	A	A	D	L	T	P	I	S	P	S	D	V	H	K	V	L	V	D	R	L	G	L	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T		S					T	T					T	T																T	T										T	T		B		T	T	S		B													T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	I	T	T	L	G	H	V	Q	R	G	G	T	A	V	A	Y	D	R	I	L	A	T	L	Q	G	L	E	A	V	N	A	V	L	E	S	T	P	D	T	P	S	P	L	I	A	V	N	E	N	K	I	V	R	K	P	L	M	E	S	V	K	L	T	K	A	V	A	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	G	T		S																										T	T	S								S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	Q	A	K	D	F	K	R	A	M	S	L	R	D	T	E	F	I	E	H	L	N	N	F	M	A	I	N	S	A	D	H	N	E	P	K	L	P	K	D	K	R	L	K	I	A	I	V	N	V	G	A	P	A	G	G	I	N	S	A	V	Y	S	M	A	T	Y	C	M	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T									S		T	T														T	T	S	S	T	T		S	S	S	S											S	S			T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	G	H	R	P	Y	A	I	Y	N	G	W	S	G	L	A	R	H	E	S	V	R	S	L	N	W	K	D	M	L	G	W	Q	S	R	G	G	S	E	I	G	T	N	R	V	T	P	E	E	A	D	L	G	M	I	A	Y	Y	F	Q	K	Y	E	F	D	G	L	I	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T							T	T																G	G	G	G	T	T	G	G	G			S		T	T							G	G	G	G													T		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	G	F	E	A	F	E	S	L	H	Q	L	E	R	A	R	E	S	Y	P	A	F	R	I	P	M	V	L	I	P	A	T	L	S	N	N	V	P	G	T	E	Y	S	L	G	S	D	T	A	L	N	A	L	M	E	Y	C	D	V	V	K	Q	S	A	S	S	T	R	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S												T	T	T	T	T		G	G	G		S							B		T	T				S	S		S			B	T																							S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	F	V	V	D	C	Q	G	G	N	S	G	Y	L	A	T	Y	A	S	L	A	V	G	A	Q	V	S	Y	V	P	E	E	G	I	S	L	E	Q	L	S	E	D	I	E	Y	L	A	Q	S	F	E	K	A	E	G	R	G	R	F	G	K	L	I	L	K	S	T	N	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T													T		S					T	T	T																						T	T		T	T									G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	A	L	S	A	T	K	L	A	E	V	I	T	A	E	A	D	G	R	F	D	A	K	P	A	Y	P	G	H	V	Q	Q	G	G	L	P	S	P	I	D	R	T	R	A	T	R	M	A	I	K	A	V	G	F	I	K	D	N	Q	A	A	I	A	E	A	R	A	A	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S															T	T	S									G	G	G	G	G		S	S																							T	S							S	S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
Sequence	N	F	N	A	D	D	K	T	I	S	D	T	A	A	V	V	G	V	K	G	S	H	V	V	Y	N	S	I	R	Q	L	Y	D	Y	E	T	E	V	S	M	R	M	P	K	V	I	H	W	Q	A	T	R	L	I	A	D	H	L	V	G	R	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									T	T	S						S	S	S														T	B		G	G	G	S	S	B	S	S		S													T

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PDB structure

FASTA sequence

Hidden Markov model

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