PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2qcoA_

Fold library id	PDB Header	Molecule	Title
c2qcoA_	PDB header: transcription	Chain: A: PDB Molecule: cmer;	PDBTitle: crystal structure of the transcriptional regulator cmer2 from campylobacter jejuni

Links to external resources
Added to library: Tue Mar 16 13:25:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T P S Q K V L A R Q E K I K A V A L E L F L T K G Y Q E T S L S D I I K L S G G S Y S N I Y D G F K S K E G L F F E I L D D I C K K H F H L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T
T T
T T
S S S T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I Y S K T Q E I K N G T L K E I L T S F G L A F I E I F N Q P E A V A F G K I I Y S Q V Y D K D R H L A N W I E N N Q Q N F S Y N I L M G F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
T S G G G
S S
S T T S S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . .

Sequence F K Q Q N N S Y M K K N A E K L A V L F C T M L K E P Y H H L N V L I N A P L K N K K E Q K E H V E F V V N V F L N G I N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T T
T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	P	S	Q	K	V	L	A	R	Q	E	K	I	K	A	V	A	L	E	L	F	L	T	K	G	Y	Q	E	T	S	L	S	D	I	I	K	L	S	G	G	S	Y	S	N	I	Y	D	G	F	K	S	K	E	G	L	F	F	E	I	L	D	D	I	C	K	K	H	F	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T	T	T	T												T	T		T	T		S	S	S	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	Y	S	K	T	Q	E	I	K	N	G	T	L	K	E	I	L	T	S	F	G	L	A	F	I	E	I	F	N	Q	P	E	A	V	A	F	G	K	I	I	Y	S	Q	V	Y	D	K	D	R	H	L	A	N	W	I	E	N	N	Q	Q	N	F	S	Y	N	I	L	M	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T	S																		T	S													G	G	G		S	S										S	T	T	S	S	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Sequence	F	K	Q	Q	N	N	S	Y	M	K	K	N	A	E	K	L	A	V	L	F	C	T	M	L	K	E	P	Y	H	H	L	N	V	L	I	N	A	P	L	K	N	K	K	E	Q	K	E	H	V	E	F	V	V	N	V	F	L	N	G	I	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S							T														T	T																															T		S