Emaill.a.kelley@imperial.ac.uk
DescriptionP24200
DateThu Jan 5 11:41:10 GMT 2012
Unique Job ID992fcda1a66e33ca

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c2qgpA_



98.9 26 PDB header:hydrolase
Chain: A: PDB Molecule:hnh endonuclease;
PDBTitle: x-ray structure of the nhn endonuclease from geobacter2 metallireducens. northeast structural genomics consortium3 target gmr87.
2d2gykb1



96.1 34 Fold:His-Me finger endonucleases
Superfamily:His-Me finger endonucleases
Family:HNH-motif
3c7ceiB_



88.4 31 PDB header:immune system
Chain: B: PDB Molecule:protein (colicin e7 immunity protein);
PDBTitle: the endonuclease domain of colicin e7 in complex with its inhibitor2 im7 protein
4c2qnfB_



82.7 20 PDB header:hydrolase/dna
Chain: B: PDB Molecule:recombination endonuclease vii;
PDBTitle: crystal structure of t4 endonuclease vii h43n mutant in2 complex with heteroduplex dna containing base mismatches
5d1e7la2



80.3 22 Fold:His-Me finger endonucleases
Superfamily:His-Me finger endonucleases
Family:Recombination endonuclease VII, N-terminal domain
6c2orvB_



76.1 32 PDB header:transferase
Chain: B: PDB Molecule:thymidine kinase;
PDBTitle: human thymidine kinase 1 in complex with tp4a
7c1w4rC_



72.2 30 PDB header:transferase
Chain: C: PDB Molecule:thymidine kinase;
PDBTitle: structure of a type ii thymidine kinase with bound dttp
8c2b8tA_



69.9 26 PDB header:transferase
Chain: A: PDB Molecule:thymidine kinase;
PDBTitle: crystal structure of thymidine kinase from u.urealyticum in2 complex with thymidine
9c2qq0B_



66.5 32 PDB header:transferase
Chain: B: PDB Molecule:thymidine kinase;
PDBTitle: thymidine kinase from thermotoga maritima in complex with2 thymidine + appnhp
10d2jb0b1



63.0 32 Fold:His-Me finger endonucleases
Superfamily:His-Me finger endonucleases
Family:HNH-motif
11d2b8ta2



59.5 22 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:Type II thymidine kinase zinc finger
12d1xbta2



50.8 29 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:Type II thymidine kinase zinc finger
13c3goxB_



44.7 20 PDB header:hydrolase/dna
Chain: B: PDB Molecule:restriction endonuclease hpy99i;
PDBTitle: crystal structure of the beta-beta-alpha-me type ii restriction2 endonuclease hpy99i in the absence of edta
14d1jhfa1



42.6 22 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:LexA repressor, N-terminal DNA-binding domain
15c1xx6B_



40.5 24 PDB header:transferase
Chain: B: PDB Molecule:thymidine kinase;
PDBTitle: x-ray structure of clostridium acetobutylicum thymidine kinase with2 adp. northeast structural genomics target car26.
16c2iqjB_



38.4 31 PDB header:protein transport
Chain: B: PDB Molecule:stromal membrane-associated protein 1-like;
PDBTitle: crystal structure of the gap domain of smap1l (loc64744)2 stromal membrane-associated protein 1-like
17c3e2iA_



37.7 20 PDB header:transferase
Chain: A: PDB Molecule:thymidine kinase;
PDBTitle: crystal structure of thymidine kinase from s. aureus
18c2vr0A_



34.0 20 PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome c nitrite reductase, catalytic subunit nfra;
PDBTitle: crystal structure of cytochrome c nitrite reductase nrfha2 complex bound to the hqno inhibitor
19d1qdba_



29.4 24 Fold:Multiheme cytochromes
Superfamily:Multiheme cytochromes
Family:Di-heme elbow motif
20c1tvtA_



27.3 22 PDB header:transcription regulation
Chain: A: PDB Molecule:transactivator protein;
PDBTitle: structure of the equine infectious anemia virus tat protein
21c3h7hA_



not modelled 24.2 26 PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt4;
PDBTitle: crystal structure of the human transcription elongation factor dsif,2 hspt4/hspt5 (176-273)
22d1vp8a_



not modelled 23.8 28 Fold:Pyruvate kinase C-terminal domain-like
Superfamily:PK C-terminal domain-like
Family:MTH1675-like
23d2dj7a1



not modelled 23.3 33 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
24c3lvrE_



not modelled 23.1 36 PDB header:protein transport
Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain-
PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
25c2ju5A_



not modelled 22.0 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin disulfide isomerase;
PDBTitle: dsbh oxidoreductase
26c2p57A_



not modelled 21.7 29 PDB header:metal binding protein
Chain: A: PDB Molecule:gtpase-activating protein znf289;
PDBTitle: gap domain of znf289, an id1-regulated zinc finger protein
27d2glia5



not modelled 21.5 46 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
28d1jx6a_



not modelled 21.5 22 Fold:Periplasmic binding protein-like I
Superfamily:Periplasmic binding protein-like I
Family:L-arabinose binding protein-like
29c2wy3B_



not modelled 21.0 48 PDB header:immune system/viral protein
Chain: B: PDB Molecule:uncharacterized protein ul16;
PDBTitle: structure of the hcmv ul16-micb complex elucidates select2 binding of a viral immunoevasin to diverse nkg2d ligands
30c2f3oB_



not modelled 20.2 24 PDB header:unknown function
Chain: B: PDB Molecule:pyruvate formate-lyase 2;
PDBTitle: crystal structure of a glycyl radical enzyme from archaeoglobus2 fulgidus
31d1xx6a2



not modelled 19.8 29 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:Type II thymidine kinase zinc finger
32c3hcwB_



not modelled 19.8 25 PDB header:rna binding protein
Chain: B: PDB Molecule:maltose operon transcriptional repressor;
PDBTitle: crystal structure of probable maltose operon transcriptional repressor2 malr from staphylococcus areus
33c2ja1A_



not modelled 19.3 21 PDB header:transferase
Chain: A: PDB Molecule:thymidine kinase;
PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor.
34c3m7kA_



not modelled 18.9 22 PDB header:hydrolase/dna
Chain: A: PDB Molecule:restriction endonuclease paci;
PDBTitle: crystal structure of paci-dna enzyme product complex
35c3na7A_



not modelled 17.9 34 PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874
36d1x3ha2



not modelled 17.7 35 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
37d2jnea1



not modelled 17.5 54 Fold:Rubredoxin-like
Superfamily:YfgJ-like
Family:YfgJ-like
38c2jneA_



not modelled 17.5 54 PDB header:metal binding protein
Chain: A: PDB Molecule:hypothetical protein yfgj;
PDBTitle: nmr structure of e.coli yfgj modelled with two zn+2 bound.2 northeast structural genomics consortium target er317.
39c3iraA_



not modelled 17.1 25 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved protein;
PDBTitle: the crystal structure of one domain of the conserved protein from2 methanosarcina mazei go1
40c1yshD_



not modelled 16.9 53 PDB header:structural protein/rna
Chain: D: PDB Molecule:ribosomal protein l37a;
PDBTitle: localization and dynamic behavior of ribosomal protein l30e
41d1jj2y_



not modelled 16.5 26 Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
42d1r9da_



not modelled 16.1 22 Fold:PFL-like glycyl radical enzymes
Superfamily:PFL-like glycyl radical enzymes
Family:PFL-like
43c2x41A_



not modelled 16.1 42 PDB header:hydrolase
Chain: A: PDB Molecule:beta-glucosidase;
PDBTitle: structure of beta-glucosidase 3b from thermotoga neapolitana2 in complex with glucose
44c2d9lA_



not modelled 16.0 24 PDB header:gene regulation
Chain: A: PDB Molecule:nucleoporin-like protein rip;
PDBTitle: solution structure of the arfgap domain of human rip
45c2zkrz_



not modelled 16.0 41 PDB header:ribosomal protein/rna
Chain: Z: PDB Molecule:e site t-rna;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
46c2j7aE_



not modelled 15.3 18 PDB header:oxidoreductase
Chain: E: PDB Molecule:cytochrome c nitrite reductase nrfa;
PDBTitle: crystal structure of cytochrome c nitrite reductase nrfha2 complex from desulfovibrio vulgaris
47c2jrpA_



not modelled 15.2 46 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative cytoplasmic protein;
PDBTitle: solution nmr structure of yfgj from salmonella typhimurium2 modeled with two zn+2 bound, northeast structural genomics3 consortium target str86
48c3dwdB_



not modelled 15.0 31 PDB header:transport protein
Chain: B: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1;
PDBTitle: crystal structure of the arfgap domain of human arfgap1
49d1vqoz1



not modelled 14.8 21 Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
50c1fs9A_



not modelled 14.7 33 PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome c nitrite reductase;
PDBTitle: cytochrome c nitrite reductase from wolinella succinogenes-azide2 complex
51c2b0oF_



not modelled 14.5 38 PDB header:metal binding protein
Chain: F: PDB Molecule:uplc1;
PDBTitle: crystal structure of uplc1 gap domain
52c2joxA_



not modelled 14.1 28 PDB header:transcription
Chain: A: PDB Molecule:churchill protein;
PDBTitle: embryonic neural inducing factor churchill is not a dna-2 binding zinc finger protein: solution structure reveals a3 solvent-exposed beta-sheet and zinc binuclear cluster
53c1i6hA_



not modelled 14.0 17 PDB header:transcription/dna-rna hybrid
Chain: A: PDB Molecule:dna-directed rna polymerase ii largest subunit;
PDBTitle: rna polymerase ii elongation complex
54d2ic1a1



not modelled 13.9 26 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:Cysteine dioxygenase type I
55c3qqcA_



not modelled 13.8 21 PDB header:transcription
Chain: A: PDB Molecule:dna-directed rna polymerase subunit b, dna-directed rna
PDBTitle: crystal structure of archaeal spt4/5 bound to the rnap clamp domain
56d3elna1



not modelled 13.6 26 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:Cysteine dioxygenase type I
57c2y8nC_



not modelled 13.5 20 PDB header:lyase
Chain: C: PDB Molecule:4-hydroxyphenylacetate decarboxylase large subunit;
PDBTitle: crystal structure of glycyl radical enzyme
58d1fs7a_



not modelled 13.3 33 Fold:Multiheme cytochromes
Superfamily:Multiheme cytochromes
Family:Di-heme elbow motif
59c3cc4Z_



not modelled 13.3 24 PDB header:ribosome
Chain: Z: PDB Molecule:50s ribosomal protein l37ae;
PDBTitle: co-crystal structure of anisomycin bound to the 50s ribosomal subunit
60c4a17Y_



not modelled 13.2 47 PDB header:ribosome
Chain: Y: PDB Molecule:rpl37a;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2.
61d1vh3a_



not modelled 12.8 21 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
62d1ubdc1



not modelled 12.6 50 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
63d1weoa_



not modelled 12.5 21 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
64d1ffkw_



not modelled 12.4 19 Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
65d1inza_



not modelled 11.6 31 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:ENTH domain
66c3f9uA_



not modelled 11.1 13 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative exported cytochrome c biogenesis-related protein;
PDBTitle: crystal structure of c-terminal domain of putative exported cytochrome2 c biogenesis-related protein from bacteroides fragilis
67d1twfa_



not modelled 10.9 17 Fold:beta and beta-prime subunits of DNA dependent RNA-polymerase
Superfamily:beta and beta-prime subunits of DNA dependent RNA-polymerase
Family:RNA-polymerase beta-prime
68c3jyw9_



not modelled 10.9 29 PDB header:ribosome
Chain: 9: PDB Molecule:60s ribosomal protein l43;
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
69c1rikA_



not modelled 10.6 38 PDB header:de novo protein
Chain: A: PDB Molecule:e6apc1 peptide;
PDBTitle: e6-binding zinc finger (e6apc1)
70d1hs5a_



not modelled 10.6 100 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
71d1n5ga_



not modelled 10.5 33 Fold:Zinc finger domain of DNA polymerase-alpha
Superfamily:Zinc finger domain of DNA polymerase-alpha
Family:Zinc finger domain of DNA polymerase-alpha
72d2fiya1



not modelled 10.4 32 Fold:FdhE-like
Superfamily:FdhE-like
Family:FdhE-like
73c1x4lA_



not modelled 10.2 28 PDB header:metal binding protein
Chain: A: PDB Molecule:skeletal muscle lim-protein 3;
PDBTitle: solution structure of lim domain in four and a half lim2 domains protein 2
74c3cueH_



not modelled 9.9 25 PDB header:protein transport
Chain: H: PDB Molecule:transport protein particle 31 kda subunit;
PDBTitle: crystal structure of a trapp subassembly activating the rab2 ypt1p
75c2qu7B_



not modelled 9.8 21 PDB header:transcription
Chain: B: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of a putative transcription regulator2 from staphylococcus saprophyticus subsp. saprophyticus
76d1h16a_



not modelled 9.6 20 Fold:PFL-like glycyl radical enzymes
Superfamily:PFL-like glycyl radical enzymes
Family:PFL-like
77c2l4zA_



not modelled 9.5 26 PDB header:hydrolase, metal binding protein
Chain: A: PDB Molecule:dna endonuclease rbbp8, lim domain transcription factor
PDBTitle: nmr structure of fusion of ctip (641-685) to lmo4-lim1 (18-82)
78c3pnnA_



not modelled 9.2 22 PDB header:transferase
Chain: A: PDB Molecule:conserved domain protein;
PDBTitle: the crystal structure of a glycosyltransferase from porphyromonas2 gingivalis w83
79c3c3kA_



not modelled 9.1 20 PDB header:isomerase
Chain: A: PDB Molecule:alanine racemase;
PDBTitle: crystal structure of an uncharacterized protein from actinobacillus2 succinogenes
80c3gbvB_



not modelled 9.1 13 PDB header:transcription regulator
Chain: B: PDB Molecule:putative laci-family transcriptional regulator;
PDBTitle: crystal structure of a putative laci transcriptional regulator from2 bacteroides fragilis
81c1m3vA_



not modelled 9.1 15 PDB header:metal binding protein
Chain: A: PDB Molecule:fusion of the lim interacting domain of ldb1 and
PDBTitle: flin4: fusion of the lim binding domain of ldb1 and the n-2 terminal lim domain of lmo4
82c3o47A_



not modelled 9.1 28 PDB header:hydrolase, hydrolase activator
Chain: A: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1, adp-
PDBTitle: crystal structure of arfgap1-arf1 fusion protein
83c3jywY_



not modelled 9.0 38 PDB header:ribosome
Chain: Y: PDB Molecule:60s ribosomal protein l37(a);
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
84c2qh8A_



not modelled 8.9 10 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved domain protein from vibrio2 cholerae o1 biovar eltor str. n16961
85c1b8tA_



not modelled 8.9 32 PDB header:contractile
Chain: A: PDB Molecule:protein (crp1);
PDBTitle: solution structure of the chicken crp1
86c1vhkA_



not modelled 8.8 24 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein yqeu;
PDBTitle: crystal structure of an hypothetical protein
87c3fxhA_



not modelled 8.8 58 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:integron gene cassette protein hfx_cass2;
PDBTitle: crystal structure from the mobile metagenome of halifax2 harbour sewage outfall: integron cassette protein hfx_cass2
88c2zkr2_



not modelled 8.7 38 PDB header:ribosomal protein/rna
Chain: 2: PDB Molecule:60s ribosomal protein l37e;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
89c2r5iL_



not modelled 8.7 33 PDB header:viral protein
Chain: L: PDB Molecule:l1 protein;
PDBTitle: pentamer structure of major capsid protein l1 of human2 papilloma virus type 18
90c2o20H_



not modelled 8.5 30 PDB header:transcription
Chain: H: PDB Molecule:catabolite control protein a;
PDBTitle: crystal structure of transcription regulator ccpa of lactococcus2 lactis
91c3ac0B_



not modelled 8.4 35 PDB header:hydrolase
Chain: B: PDB Molecule:beta-glucosidase i;
PDBTitle: crystal structure of beta-glucosidase from kluyveromyces marxianus in2 complex with glucose
92c1s1iY_



not modelled 8.3 38 PDB header:ribosome
Chain: Y: PDB Molecule:60s ribosomal protein l37-a;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h.
93d1qcva_



not modelled 8.3 20 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
94c3gn5B_



not modelled 8.3 15 PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021);
PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
95c3mizB_



not modelled 8.1 14 PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator protein, laci
PDBTitle: crystal structure of a putative transcriptional regulator2 protein, lacl family from rhizobium etli
96d2yt9a2



not modelled 8.0 83 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
97c3e56A_



not modelled 8.0 19 PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the 2.0 angstrom resolution crystal structure of npr1517, a putative2 heterocyst differentiation inhibitor from nostoc punctiforme
98d2dlqa4



not modelled 7.8 67 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
99c1tjlD_



not modelled 7.8 56 PDB header:transcription
Chain: D: PDB Molecule:dnak suppressor protein;
PDBTitle: crystal structure of transcription factor dksa from e. coli