PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2qu7B_

Fold library id	PDB Header	Molecule	Title
c2qu7B_	PDB header: transcription	Chain: B: PDB Molecule: putative transcriptional regulator;	PDBTitle: crystal structure of a putative transcription regulator2 from staphylococcus saprophyticus subsp. saprophyticus

Links to external resources
Added to library: Tue Mar 16 12:39:40 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R S N I I A F I V P D Q N P F F T E V L T E I S H E C Q K H H L H V A V A S S E E N E D K Q Q D L I E T F V S Q N V S A I I L V P V K S K F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G T
T T
T T
S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q M K R E W L K I P I M T L D R E L E S T S L P S I T V D N E E A A Y I A T K R V L E S T C K E V G L L L A N P N I S T T I G R K N G Y N K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T S
S S
T T
T T T
S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A I S E F D L N V N P S L I H Y S D Q Q L G T N A Q I Y S G Y E A T K T L L S K G I K G I V A T N H L L L L G A L Q A I K E S E K E I K K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G
S S
S T T
S S S
B T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . .

Sequence V I I V G F D D S Y W N E I Y T P K L T V I S Q P V K E M G Q V A A K M I Y K L I K G K D V T S I K L S T K L I I R E S C S F N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B S
S S S
T T
S T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	S	N	I	I	A	F	I	V	P	D	Q	N	P	F	F	T	E	V	L	T	E	I	S	H	E	C	Q	K	H	H	L	H	V	A	V	A	S	S	E	E	N	E	D	K	Q	Q	D	L	I	E	T	F	V	S	Q	N	V	S	A	I	I	L	V	P	V	K	S	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S																	G	G	G	T									T	T															T	T									S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	M	K	R	E	W	L	K	I	P	I	M	T	L	D	R	E	L	E	S	T	S	L	P	S	I	T	V	D	N	E	E	A	A	Y	I	A	T	K	R	V	L	E	S	T	C	K	E	V	G	L	L	L	A	N	P	N	I	S	T	T	I	G	R	K	N	G	Y	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	T	T	S						S	S			T	T																							T	T	T			S								T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	I	S	E	F	D	L	N	V	N	P	S	L	I	H	Y	S	D	Q	Q	L	G	T	N	A	Q	I	Y	S	G	Y	E	A	T	K	T	L	L	S	K	G	I	K	G	I	V	A	T	N	H	L	L	L	L	G	A	L	Q	A	I	K	E	S	E	K	E	I	K	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T					G	G	G						S	S		S																		T	T								S														S	S			B	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Sequence	V	I	I	V	G	F	D	D	S	Y	W	N	E	I	Y	T	P	K	L	T	V	I	S	Q	P	V	K	E	M	G	Q	V	A	A	K	M	I	Y	K	L	I	K	G	K	D	V	T	S	I	K	L	S	T	K	L	I	I	R	E	S	C	S	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B						S								S	S	S																									T	T																S	T	T	S