Fold library entry viewer: c2y8nC_

Added to library: Sat Sep 24 10:22:30 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	I	P	E	A	K	E	S	T	Q	K	L	M	D	I	Y	Y	T	L	K	V	T	A	D	M	E	A	A	Y	W	Y	N	R	T	W	W	E	N	D	G	E	V	I	E	V	R	R	A	K	A	V	A	A	S	L	S	H	M	T	P	T	I	L	P	Y	E	K	L	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T							S													T	T	T	S																T	S						T	T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	K	T	K	N	V	R	G	A	F	P	F	P	W	V	C	A	S	F	F	N	A	Q	A	E	A	L	M	N	E	V	D	A	P	A	E	N	E	A	D	S	V	S	V	V	G	A	G	G	G	N	V	T	E	S	Y	G	N	V	I	S	I	A	K	K	F	G	M	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S	S	T	T						T	T	T														T	T	S											T						S	T	T				S		B	T	T					T	T	T					G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	E	I	P	V	L	V	K	T	S	K	P	W	E	G	I	S	V	E	E	L	S	N	K	Y	S	K	M	T	P	G	Y	D	Q	F	K	N	I	M	E	S	V	I	C	M	F	D	S	F	A	I	P	Q	G	R	E	V	I	N	Y	Y	M	P	L	Q	Y	G	F	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G									G	G	G	T	T	T	S										T	T	S	T	T										T	T	S	B				G	G	G	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	I	K	L	C	D	E	K	I	A	E	V	M	G	E	A	G	D	D	G	D	F	G	M	S	R	G	Y	Y	Y	A	A	M	K	E	I	T	K	G	L	S	A	W	C	E	N	Y	S	K	R	A	K	Y	L	A	S	I	E	T	D	S	E	I	K	A	N	Y	E	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T			T	T		T	T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	E	V	M	G	N	I	A	H	K	K	P	A	N	F	W	E	A	I	Q	M	T	L	C	C	H	F	G	V	V	N	E	D	P	Q	S	G	L	S	I	G	R	L	G	Q	V	L	Q	P	F	Y	E	K	D	V	E	D	G	I	M	T	D	E	E	V	I	E	L	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S				S																	T	T	S								B						S										T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	Y	R	I	K	I	T	C	I	E	C	F	A	S	A	G	V	S	G	G	V	L	S	G	N	T	F	N	N	L	S	L	G	G	Q	N	Y	D	G	L	S	A	V	T	P	L	E	Y	L	I	V	E	A	G	M	R	N	Q	T	P	Q	P	T	L	S	V	L	Y	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T											T	T	T	S	T	T											B		T	T	S	S	B																S			S		S								T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	T	P	E	D	F	L	M	K	A	A	S	C	T	K	L	G	L	G	Y	P	A	W	M	N	N	Q	T	G	M	N	F	M	M	R	N	Y	G	P	E	G	M	D	L	H	D	A	R	A	W	C	L	G	G	C	L	E	S	A	P	G	C	F	L	P	L	E	Y	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S													T	T	T	S			S																	G	G	G	T								T					T	T	T													T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	V	T	M	I	P	G	G	A	S	P	T	C	G	T	G	V	H	F	I	G	M	P	K	V	L	E	L	V	L	T	N	G	L	D	K	R	T	G	K	Q	V	Y	P	P	H	N	K	K	L	D	S	Y	E	T	M	V	N	Q	W	K	E	Y	M	E	L	T	T	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S		S	S																	T	T	T			T	T	T	T				S									S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	N	R	C	N	N	I	Q	M	D	I	W	R	K	Y	N	M	P	A	V	N	S	L	L	K	P	D	C	F	K	K	G	K	H	I	G	T	M	G	A	R	Y	N	S	C	I	N	F	E	S	C	G	T	I	T	F	V	N	S	L	S	S	I	K	K	N	V	F	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S			S						S	T	T					T			G	G	G	T		S	S			T	T																						T	T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	K	F	T	I	E	E	M	T	D	A	M	L	N	N	F	G	F	K	T	A	Y	E	T	E	V	F	S	P	D	F	R	E	S	T	D	K	S	T	K	Y	E	K	I	F	A	A	C	V	N	A	P	K	Y	G	N	A	D	K	Y	A	D	E	I	F	K	A	Y	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S											T	G	G	G	B										S	T	T				B		T	T														S			T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Y	I	Y	D	M	T	H	K	F	R	S	Y	Y	G	K	P	L	Y	L	C	Q	I	S	V	S	T	H	G	P	Q	G	F	V	T	L	A	T	A	D	G	R	L	A	G	T	T	Y	S	D	G	S	V	S	A	A	A	G	T	D	K	N	G	I	Y	A	I	F	E	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		B		T	T	S		B								T	T	T								S				T	T	S			T	T					S	T	T	T	S			T	T				S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	T	V	Y	D	H	S	M	H	Q	N	A	Q	M	N	L	K	L	H	P	T	A	V	K	G	I	N	G	T	R	K	L	L	D	L	V	R	A	Y	M	R	K	G	G	F	H	V	Q	F	N	V	V	D	S	K	T	L	R	D	A	Q	L	T	P	E	K	Y	R	E	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S		G	G	G	S	S										G	G	G	G																				T									S												G	G	G		T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.
Sequence	V	R	V	A	G	F	T	Q	Y	W	C	E	I	G	K	P	I	Q	D	E	V	I	Y	R	T	E	Y	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S					G	G	G	S											S

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PDB structure

FASTA sequence

Hidden Markov model

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