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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2ja1A_ | PDB header: transferase | Chain: A: PDB Molecule: thymidine kinase; | PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor. |
Added to library: Tue Mar 16 12:29:07 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | G | S | M | Y | L | I | N | Q | N | G | W | I | E | V | I | C | G | S | M | F | S | G | K | S | E | E | L | I | R | R | V | R | R | T | Q | F | A | K | Q | H | A | I | V | F | K | P | C | I | D | N | R | Y | S | E | E | D | V | V | S | H | N | G | L | K | V | K | A | V | P | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | S | A | S | K | D | I | F | E | H | I | T | E | E | L | D | V | I | A | I | D | E | V | Q | F | F | D | G | D | I | V | E | V | V | Q | V | L | A | N | R | G | Y | R | V | I | V | A | G | L | D | Q | D | F | R | G | L | P | F | G | Q | V | P | Q | L | M | A | I | A | E | H | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | G | G | G | G | G | G | G | S | S | ![]() | ![]() | ![]() | ![]() | S | S | G | G | G | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | T | T | S | B | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
Sequence | T | K | L | Q | A | V | C | S | V | C | G | S | P | A | S | R | T | Q | R | L | I | D | G | E | P | A | A | F | D | D | P | I | I | L | V | G | A | S | E | S | Y | E | P | R | C | R | H | C | H | A | V | P | A | |||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | B | T | T | T | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T |
Download: | PDB structure | FASTA sequence |
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