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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3o47A_

Fold library idPDB HeaderMoleculeTitle
c3o47A_PDB header: hydrolase, hydrolase activatorChain: A: PDB Molecule: adp-ribosylation factor gtpase-activating protein 1, adp-PDBTitle: crystal structure of arfgap1-arf1 fusion protein


Added to library: Sun Aug 29 00:46:03 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEK
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Known secondary structure (DSSP)
STTTTB
TTT

BS

GGGT

TTT

SSS



 .........80.........90.........100.........110.........120.........130.........140
Sequence MKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALAEGREWSLESWTPPQKKEMRILMVGL
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Known secondary structure (DSSP)

T
SS

TT

STT



S








SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGRPLWRHYFQNTQGLIFVVDSNDRERV
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Known secondary structure (DSSP) TTSST
SS

TTTT



STTTT
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGL
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Known secondary structure (DSSP) T
GGGTT

TTSTT


T
TT

SS

BTTTTBT
 .........
Sequence DWLSNQLRN
Predicted secondary structure

SS confidence








Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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