| 1 | c1z1bA_ |
|
 |
100.0 |
16 |
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:integrase;
PDBTitle: crystal structure of a lambda integrase dimer bound to a2 coc' core site
|
| 2 | d1p7da_ |
|
 |
99.9 |
15 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 3 | c3nkhB_ |
|
 |
99.9 |
22 |
PDB header:recombination
Chain: B: PDB Molecule:integrase;
PDBTitle: crystal structure of integrase from mrsa strain staphylococcus aureus
|
| 4 | c1ma7A_ |
|
 |
99.9 |
14 |
PDB header:hydrolase, ligase/dna
Chain: A: PDB Molecule:cre recombinase;
PDBTitle: crystal structure of cre site-specific recombinase2 complexed with a mutant dna substrate, loxp-a8/t27
|
| 5 | c1crxA_ |
|
 |
99.9 |
13 |
PDB header:replication/dna
Chain: A: PDB Molecule:cre recombinase;
PDBTitle: cre recombinase/dna complex reaction intermediate i
|
| 6 | d1aiha_ |
|
 |
99.9 |
16 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 7 | c1a0pA_ |
|
 |
99.9 |
16 |
PDB header:dna recombination
Chain: A: PDB Molecule:site-specific recombinase xerd;
PDBTitle: site-specific recombinase, xerd
|
| 8 | c2a3vA_ |
|
 |
99.9 |
14 |
PDB header:recombination
Chain: A: PDB Molecule:site-specific recombinase inti4;
PDBTitle: structural basis for broad dna-specificity in integron2 recombination
|
| 9 | d1a0pa2 |
|
 |
99.8 |
16 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 10 | d1f44a2 |
|
 |
99.8 |
12 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 11 | d1ae9a_ |
|
 |
99.8 |
16 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 12 | d5crxb2 |
|
 |
99.6 |
12 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core |
| 13 | c3ju0A_ |
|
 |
99.4 |
68 |
PDB header:dna binding protein
Chain: A: PDB Molecule:phage integrase;
PDBTitle: structure of the arm-type binding domain of hai7 integrase
|
| 14 | c3jtzA_ |
|
 |
99.2 |
51 |
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: structure of the arm-type binding domain of hpi integrase
|
| 15 | c2kkvA_ |
|
 |
98.7 |
53 |
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: solution nmr structure of an integrase domain from protein2 spa4288 from salmonella enterica, northeast structural3 genomics consortium target slr105h
|
| 16 | c2kj9A_ |
|
 |
98.6 |
45 |
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: nmr structure of intb phage-integrase-like protein fragment2 90-199 from erwinia carotova subsp. atroseptica: northeast3 structural genomics consortium target ewr217e
|
| 17 | c2kiwA_ |
|
 |
98.5 |
16 |
PDB header:dna binding protein
Chain: A: PDB Molecule:int protein;
PDBTitle: solution nmr structure of the domain n-terminal to the2 integrase domain of sh1003 from staphylococcus3 haemolyticus. northeast structural genomics consortium4 target shr105f (64-166).
|
| 18 | c2kj5A_ |
|
 |
98.4 |
22 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phage integrase;
PDBTitle: solution nmr structure of a domain from a putative phage2 integrase protein nmul_a0064 from nitrosospira multiformis,3 northeast structural genomics consortium target nmr46c
|
| 19 | c2kj8A_ |
|
 |
98.4 |
27 |
PDB header:dna binding protein
Chain: A: PDB Molecule:putative prophage cps-53 integrase;
PDBTitle: nmr structure of fragment 87-196 from the putative phage2 integrase ints of e. coli: northeast structural genomics3 consortium target er652a, psi-2
|
| 20 | c2khqA_ |
|
 |
98.2 |
12 |
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: solution nmr structure of a phage integrase ssp19472 fragment 59-159 from staphylococcus saprophyticus,3 northeast structural genomics consortium target syr103b
|
| 21 | c2kkpA_ |
|
not modelled |
98.2 |
15 |
PDB header:dna binding protein
Chain: A: PDB Molecule:phage integrase;
PDBTitle: solution nmr structure of the phage integrase sam-like2 domain from moth 1796 from moorella thermoacetica.3 northeast structural genomics consortium target mtr39k4 (residues 64-171).
|
| 22 | c3lysC_ |
|
not modelled |
98.2 |
9 |
PDB header:recombination
Chain: C: PDB Molecule:prophage pi2 protein 01, integrase;
PDBTitle: crystal structure of the n-terminal domain of the prophage2 pi2 protein 01 (integrase) from lactococcus lactis,3 northeast structural genomics consortium target kr124f
|
| 23 | c2oxoA_ |
|
not modelled |
98.1 |
13 |
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: crystallization and structure determination of the core-2 binding domain of bacteriophage lambda integrase
|
| 24 | c2khvA_ |
|
not modelled |
98.1 |
17 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phage integrase;
PDBTitle: solution nmr structure of protein nmul_a0922 from2 nitrosospira multiformis. northeast structural genomics3 consortium target nmr38b.
|
| 25 | c2kd1A_ |
|
not modelled |
98.1 |
12 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:dna integration/recombination/invertion protein;
PDBTitle: solution nmr structure of the integrase-like domain from2 bacillus cereus ordered locus bc_1272. northeast3 structural genomics consortium target bcr268f
|
| 26 | c2kobA_ |
|
not modelled |
97.9 |
17 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of clolep_01837 (fragment 61-160)2 from clostridium leptum. northeast structural genomics3 consortium target qlr8a
|
| 27 | c2keyA_ |
|
not modelled |
97.3 |
15 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative phage integrase;
PDBTitle: solution nmr structure of a domain from a putative phage integrase2 protein bf2284 from bacteroides fragilis, northeast structural3 genomics consortium target bfr257c
|
| 28 | c2v6eB_ |
|
not modelled |
97.2 |
12 |
PDB header:hydrolase
Chain: B: PDB Molecule:protelemorase;
PDBTitle: protelomerase telk complexed with substrate dna
|
| 29 | c3nrwA_ |
|
not modelled |
96.7 |
9 |
PDB header:recombination
Chain: A: PDB Molecule:phage integrase/site-specific recombinase;
PDBTitle: crystal structure of the n-terminal domain of phage integrase/site-2 specific recombinase (tnp) from haloarcula marismortui, northeast3 structural genomics consortium target hmr208a
|
| 30 | c2f4qA_ |
|
not modelled |
96.4 |
16 |
PDB header:isomerase
Chain: A: PDB Molecule:type i topoisomerase, putative;
PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib
|
| 31 | c2h7fX_ |
|
not modelled |
94.6 |
17 |
PDB header:isomerase/dna
Chain: X: PDB Molecule:dna topoisomerase 1;
PDBTitle: structure of variola topoisomerase covalently bound to dna
|
| 32 | c2b9sA_ |
|
not modelled |
93.0 |
19 |
PDB header:isomerase/dna
Chain: A: PDB Molecule:topoisomerase i-like protein;
PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex
|
| 33 | d1k4ta2 |
|
not modelled |
90.9 |
16 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Eukaryotic DNA topoisomerase I, catalytic core |
| 34 | d1rr8c1 |
|
not modelled |
90.6 |
16 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Eukaryotic DNA topoisomerase I, catalytic core |
| 35 | d1a41a_ |
|
not modelled |
89.0 |
15 |
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Eukaryotic DNA topoisomerase I, catalytic core |
| 36 | c1a31A_ |
|
not modelled |
86.2 |
17 |
PDB header:isomerase/dna
Chain: A: PDB Molecule:protein (topoisomerase i);
PDBTitle: human reconstituted dna topoisomerase i in covalent complex2 with a 22 base pair dna duplex
|
| 37 | c3igmA_ |
|
not modelled |
81.9 |
11 |
PDB header:transcription/dna
Chain: A: PDB Molecule:pf14_0633 protein;
PDBTitle: a 2.2a crystal structure of the ap2 domain of pf14_0633 from p.2 falciparum, bound as a domain-swapped dimer to its cognate dna
|
| 38 | d1a0pa1 |
|
not modelled |
79.7 |
15 |
Fold:SAM domain-like
Superfamily:lambda integrase-like, N-terminal domain
Family:lambda integrase-like, N-terminal domain |
| 39 | c1nh3A_ |
|
not modelled |
74.9 |
17 |
PDB header:isomerase/dna
Chain: A: PDB Molecule:dna topoisomerase i;
PDBTitle: human topoisomerase i ara-c complex
|
| 40 | d1gcca_ |
|
not modelled |
66.8 |
25 |
Fold:DNA-binding domain
Superfamily:DNA-binding domain
Family:GCC-box binding domain |
| 41 | d1z1ba1 |
|
not modelled |
66.7 |
28 |
Fold:DNA-binding domain
Superfamily:DNA-binding domain
Family:lambda integrase N-terminal domain |
| 42 | c1kjkA_ |
|
not modelled |
65.9 |
28 |
PDB header:viral protein
Chain: A: PDB Molecule:integrase;
PDBTitle: solution structure of the lambda integrase amino-terminal2 domain
|
| 43 | d1qu6a2 |
|
not modelled |
55.4 |
13 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 44 | d1x48a1 |
|
not modelled |
45.4 |
11 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 45 | c1p4eB_ |
|
not modelled |
32.5 |
10 |
PDB header:dna binding protein/recombination/dna
Chain: B: PDB Molecule:recombinase flp protein;
PDBTitle: flpe w330f mutant-dna holliday junction complex
|
| 46 | d1x49a1 |
|
not modelled |
23.8 |
16 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 47 | d1qu6a1 |
|
not modelled |
23.6 |
14 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 48 | c2khxA_ |
|
not modelled |
21.6 |
14 |
PDB header:gene regulation,nuclear protein
Chain: A: PDB Molecule:ribonuclease 3;
PDBTitle: drosha double-stranded rna binding motif
|
| 49 | d1f44a1 |
|
not modelled |
20.6 |
11 |
Fold:SAM domain-like
Superfamily:lambda integrase-like, N-terminal domain
Family:lambda integrase-like, N-terminal domain |
| 50 | d1x47a1 |
|
not modelled |
19.5 |
9 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 51 | d1o0wa2 |
|
not modelled |
18.7 |
19 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 52 | c3adjA_ |
|
not modelled |
16.5 |
14 |
PDB header:gene regulation
Chain: A: PDB Molecule:f21m12.9 protein;
PDBTitle: structure of arabidopsis hyl1 and its molecular implications for mirna2 processing
|
| 53 | c3adiC_ |
|
not modelled |
15.2 |
12 |
PDB header:gene regulation/rna
Chain: C: PDB Molecule:f21m12.9 protein;
PDBTitle: structure of arabidopsis hyl1 and its molecular implications for mirna2 processing
|
| 54 | d2b7ta1 |
|
not modelled |
12.1 |
19 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 55 | c1or7A_ |
|
not modelled |
11.9 |
10 |
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma-e factor;
PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea
|
| 56 | c3llhB_ |
|
not modelled |
11.9 |
15 |
PDB header:rna binding protein
Chain: B: PDB Molecule:risc-loading complex subunit tarbp2;
PDBTitle: crystal structure of the first dsrbd of tar rna-binding protein 2
|
| 57 | c2l33A_ |
|
not modelled |
11.2 |
20 |
PDB header:transcription regulator
Chain: A: PDB Molecule:interleukin enhancer-binding factor 3;
PDBTitle: solution nmr structure of drbm 2 domain of interleukin enhancer-2 binding factor 3 from homo sapiens, northeast structural genomics3 consortium target hr4527e
|
| 58 | d2b7va1 |
|
not modelled |
10.5 |
14 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 59 | d1d4aa_ |
|
not modelled |
10.0 |
17 |
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Quinone reductase |
| 60 | c2l2nA_ |
|
not modelled |
10.0 |
11 |
PDB header:rna binding protein, plant protein
Chain: A: PDB Molecule:hyponastic leave 1;
PDBTitle: backbone 1h, 13c, and 15n chemical shift assignments for the first2 dsrbd of protein hyl1
|
| 61 | c2yt4A_ |
|
not modelled |
9.9 |
13 |
PDB header:rna binding protein
Chain: A: PDB Molecule:protein dgcr8;
PDBTitle: crystal structure of human dgcr8 core
|
| 62 | d2dmya1 |
|
not modelled |
9.7 |
16 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 63 | c3pmrB_ |
|
not modelled |
9.4 |
16 |
PDB header:cell adhesion
Chain: B: PDB Molecule:amyloid-like protein 1;
PDBTitle: crystal structure of e2 domain of human amyloid precursor-like protein2 1
|
| 64 | c3kmpA_ |
|
not modelled |
9.0 |
18 |
PDB header:transcription regulator/dna
Chain: A: PDB Molecule:smad1-mh1;
PDBTitle: crystal structure of smad1-mh1/dna complex
|
| 65 | d1sfka_ |
|
not modelled |
8.5 |
12 |
Fold:Flavivirus capsid protein C
Superfamily:Flavivirus capsid protein C
Family:Flavivirus capsid protein C |
| 66 | d1bb8a_ |
|
not modelled |
7.8 |
23 |
Fold:DNA-binding domain
Superfamily:DNA-binding domain
Family:DNA-binding domain from tn916 integrase |
| 67 | d1tf5a2 |
|
not modelled |
7.5 |
8 |
Fold:Helical scaffold and wing domains of SecA
Superfamily:Helical scaffold and wing domains of SecA
Family:Helical scaffold and wing domains of SecA |
| 68 | c2ka4B_ |
|
not modelled |
7.4 |
33 |
PDB header:transcription regulator
Chain: B: PDB Molecule:signal transducer and activator of transcription
PDBTitle: nmr structure of the cbp-taz1/stat2-tad complex
|
| 69 | d1nkta2 |
|
not modelled |
7.4 |
17 |
Fold:Helical scaffold and wing domains of SecA
Superfamily:Helical scaffold and wing domains of SecA
Family:Helical scaffold and wing domains of SecA |
| 70 | c2l3jA_ |
|
not modelled |
7.4 |
20 |
PDB header:hydrolase/rna
Chain: A: PDB Molecule:double-stranded rna-specific editase 1;
PDBTitle: the solution structure of the adar2 dsrbm-rna complex reveals a2 sequence-specific read out of the minor groove
|
| 71 | d1u5ta1 |
|
not modelled |
7.3 |
17 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Vacuolar sorting protein domain |
| 72 | c1f8aB_ |
|
not modelled |
7.2 |
19 |
PDB header:isomerase
Chain: B: PDB Molecule:peptidyl-prolyl cis-trans isomerase nima-
PDBTitle: structural basis for the phosphoserine-proline recognition2 by group iv ww domains
|
| 73 | d1sfkb_ |
|
not modelled |
7.1 |
12 |
Fold:Flavivirus capsid protein C
Superfamily:Flavivirus capsid protein C
Family:Flavivirus capsid protein C |
| 74 | d1r6ra_ |
|
not modelled |
7.0 |
16 |
Fold:Flavivirus capsid protein C
Superfamily:Flavivirus capsid protein C
Family:Flavivirus capsid protein C |
| 75 | c1r6rA_ |
|
not modelled |
7.0 |
16 |
PDB header:viral protein
Chain: A: PDB Molecule:genome polyprotein;
PDBTitle: solution structure of dengue virus capsid protein reveals a2 new fold
|
| 76 | c3cuqA_ |
|
not modelled |
6.9 |
15 |
PDB header:protein transport
Chain: A: PDB Molecule:vacuolar-sorting protein snf8;
PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
|
| 77 | d1j2oa2 |
|
not modelled |
6.7 |
33 |
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain |
| 78 | d2gf5a1 |
|
not modelled |
6.7 |
13 |
Fold:DEATH domain
Superfamily:DEATH domain
Family:DEATH domain, DD |
| 79 | d1di2a_ |
|
not modelled |
6.6 |
18 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 80 | d1kwga1 |
|
not modelled |
6.4 |
20 |
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain |
| 81 | c2zmeA_ |
|
not modelled |
6.4 |
17 |
PDB header:protein transport
Chain: A: PDB Molecule:vacuolar-sorting protein snf8;
PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
|
| 82 | d1uila_ |
|
not modelled |
6.2 |
14 |
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD) |
| 83 | d1e6vc_ |
|
not modelled |
6.1 |
31 |
Fold:Ferredoxin-like
Superfamily:Methyl-coenzyme M reductase subunits
Family:Methyl-coenzyme M reductase gamma chain |
| 84 | d2dgxa1 |
|
not modelled |
6.0 |
20 |
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD |
| 85 | c2eqrA_ |
|
not modelled |
5.9 |
3 |
PDB header:transcription
Chain: A: PDB Molecule:nuclear receptor corepressor 1;
PDBTitle: solution structure of the first sant domain from human2 nuclear receptor corepressor 1
|
| 86 | d2csba1 |
|
not modelled |
5.9 |
26 |
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Topoisomerase V repeat domain |
| 87 | c2kpqA_ |
|
not modelled |
5.7 |
19 |
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of agrobacterium tumefaciens protein atu1219:2 northeast structural genomics consortium target att14
|
| 88 | c2zhhA_ |
|
not modelled |
5.6 |
16 |
PDB header:transcription
Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr;
PDBTitle: crystal structure of soxr
|
| 89 | d1xc5a1 |
|
not modelled |
5.6 |
3 |
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Myb/SANT domain |
| 90 | c1qu6A_ |
|
not modelled |
5.6 |
11 |
PDB header:transferase
Chain: A: PDB Molecule:protein kinase pkr;
PDBTitle: structure of the double-stranded rna-binding domain of the2 protein kinase pkr reveals the molecular basis of its3 dsrna-mediated activation
|
| 91 | d1rw6a_ |
|
not modelled |
5.5 |
19 |
Fold:STAT-like
Superfamily:CAPPD, an extracellular domain of amyloid beta A4 protein
Family:CAPPD, an extracellular domain of amyloid beta A4 protein |
| 92 | c2ljhA_ |
|
not modelled |
5.5 |
15 |
PDB header:hydrolase
Chain: A: PDB Molecule:double-stranded rna-specific editase adar;
PDBTitle: nmr structure of double-stranded rna-specific editase adar
|
| 93 | d1q08a_ |
|
not modelled |
5.4 |
15 |
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:DNA-binding N-terminal domain of transcription activators |
| 94 | d1dwka1 |
|
not modelled |
5.4 |
11 |
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Cyanase N-terminal domain |
| 95 | c2gf5A_ |
|
not modelled |
5.3 |
13 |
PDB header:apoptosis
Chain: A: PDB Molecule:fadd protein;
PDBTitle: structure of intact fadd (mort1)
|
| 96 | d1hbnc_ |
|
not modelled |
5.3 |
25 |
Fold:Ferredoxin-like
Superfamily:Methyl-coenzyme M reductase subunits
Family:Methyl-coenzyme M reductase gamma chain |
| 97 | c2jzvA_ |
|
not modelled |
5.2 |
38 |
PDB header:isomerase
Chain: A: PDB Molecule:foldase protein prsa;
PDBTitle: solution structure of s. aureus prsa-ppiase
|
| 98 | c2nogA_ |
|
not modelled |
5.1 |
10 |
PDB header:dna binding protein
Chain: A: PDB Molecule:iswi protein;
PDBTitle: sant domain structure of xenopus remodeling factor iswi
|
| 99 | c1u5tA_ |
|
not modelled |
5.1 |
15 |
PDB header:transport protein
Chain: A: PDB Molecule:appears to be functionally related to snf7;
PDBTitle: structure of the escrt-ii endosomal trafficking complex
|
