Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1ma7A_

Fold library idPDB HeaderMoleculeTitle
c1ma7A_PDB header: hydrolase, ligase/dnaChain: A: PDB Molecule: cre recombinase;PDBTitle: crystal structure of cre site-specific recombinase2 complexed with a mutant dna substrate, loxp-a8/t27


Added to library: Tue Mar 16 12:48:15 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TSDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTI
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)
TGGGS
TT


SS

TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence QQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDI
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TTTS

GGGSTTT









TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence RNLAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVS
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)


SS
BSSSSTTTTS





SSSS
S



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARD
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP)

SSSTTSBS


B
TTS
B


SS



T
S


SS
S
SS

TT
 .........290.........300.........310.........320...
Sequence MARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGAMVRLLED
Predicted secondary structure









SS confidence










































Known secondary structure (DSSP) TT

T
S
STT
GGG

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D