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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1k4ta2

Fold library idFoldSuperfamilyFamily
d1k4ta2DNA breaking-rejoining enzymesDNA breaking-rejoining enzymesEukaryotic DNA topoisomerase I, catalytic core


Added to library: Tue Mar 16 13:33:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETAD
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Known secondary structure (DSSP)

STTTT
SSS








TTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence TVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNT
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Known secondary structure (DSSP)


GGG
BGGGTT
GGG


TTT

TTSBSSTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence GILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTF
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Known secondary structure (DSSP) STT

TT

TT

TT
B



TT
 .........220.........230.........240.........250.........260..
Sequence QIALGTSKLNLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMADEDYEF
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Known secondary structure (DSSP)
B




T

GGGTS
TS

TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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