Email l.a.kelley@imperial.ac.uk Description P0A7F6 Date Thu Jan 5 11:05:34 GMT 2012 Unique Job ID 826817c97abda794

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2iiiA_ 100.0 28 PDB header:lyase Chain: A: PDB Molecule:s-adenosylmethionine decarboxylase proenzyme; PDBTitle: crystal structure of the adenosylmethionine decarboxylase (aq_254)2 from aquifex aeolicus vf5 2 d1vr7a1 100.0 35 Fold:S-adenosylmethionine decarboxylase Superfamily:S-adenosylmethionine decarboxylase Family:Bacterial S-adenosylmethionine decarboxylase 3 c1vr7A_ 100.0 35 PDB header:lyase Chain: A: PDB Molecule:s-adenosylmethionine decarboxylase proenzyme; PDBTitle: crystal structure of s-adenosylmethionine decarboxylase proenzyme2 (tm0655) from thermotoga maritima at 1.2 a resolution 4 c3iwdC_ 99.7 39 PDB header:lyase Chain: C: PDB Molecule:s-adenosylmethionine decarboxylase; PDBTitle: t. maritima adometdc complex with 5'-deoxy-5'-dimethyl2 thioadenosine 5 c3iwcD_ 98.9 22 PDB header:lyase Chain: D: PDB Molecule:s-adenosylmethionine decarboxylase; PDBTitle: t. maritima adometdc complex with s-adenosylmethionine2 methyl ester 6 c1mhmA_ 81.8 24 PDB header:lyase Chain: A: PDB Molecule:s-adenosylmethionine decarboxylase; PDBTitle: crystal structure of s-adenosylmethionine decarboxylase2 from potato 7 c3ep3A_ 79.9 26 PDB header:lyase Chain: A: PDB Molecule:s-adenosylmethionine decarboxylase alpha chain; PDBTitle: human adometdc d174n mutant with no putrescine bound 8 c3somO_ 58.8 30 PDB header:oxidoreductase Chain: O: PDB Molecule:methylmalonic aciduria and homocystinuria type c protein; PDBTitle: crystal structure of human mmachc 9 c1msvB_ 54.9 26 PDB header:lyase Chain: B: PDB Molecule:s-adenosylmethionine decarboxylase proenzyme; PDBTitle: the s68a s-adenosylmethionine decarboxylase proenzyme2 processing mutant. 10 d1jl0a_ 50.2 28 Fold:S-adenosylmethionine decarboxylase Superfamily:S-adenosylmethionine decarboxylase Family:S-adenosylmethionine decarboxylase 11 c2lb0A_ 41.7 17 PDB header:signaling protein/transcription Chain: A: PDB Molecule:e3 ubiquitin-protein ligase smurf1; PDBTitle: structure of the first ww domain of human smurf1 in complex with a di-2 phosphorylated human smad1 derived peptide 12 d1u58a1 39.9 19 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C1 set domains (antibody constant domain-like) 13 c2lazA_ 39.4 17 PDB header:signaling protein/transcription Chain: A: PDB Molecule:e3 ubiquitin-protein ligase smurf1; PDBTitle: structure of the first ww domain of human smurf1 in complex with a2 mono-phosphorylated human smad1 derived peptide 14 c3c6kC_ 34.5 32 PDB header:transferase Chain: C: PDB Molecule:spermine synthase; PDBTitle: crystal structure of human spermine synthase in complex2 with spermidine and 5-methylthioadenosine 15 c1d9kD_ 32.8 21 PDB header:immune system Chain: D: PDB Molecule:mhc i-ak b chain (beta chain); PDBTitle: crystal structure of complex between d10 tcr and pmhc i-ak/ca 16 c3k1hA_ 31.8 19 PDB header:chaperone Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of hp1076 from h.pylori 17 c2l4jA_ 31.7 25 PDB header:transcription Chain: A: PDB Molecule:yes-associated protein 2 (yap2); PDBTitle: yap ww2 18 d1mh5h2 29.2 22 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C1 set domains (antibody constant domain-like) 19 d2f21a1 26.9 17 Fold:WW domain-like Superfamily:WW domain Family:WW domain 20 c2kl5A_ 26.3 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein yutd; PDBTitle: solution nmr structure of protein yutd from b.subtilis, northeast2 structural genomics consortium target sr232 21 c1iaoB_ not modelled 26.2 21 PDB header:mhc ii Chain: B: PDB Molecule:mhc class ii i-ad; PDBTitle: class ii mhc i-ad in complex with ovalbumin peptide 323-339 22 c1iebD_ not modelled 23.8 24 PDB header:histocompatibility antigen Chain: D: PDB Molecule:mhc class ii i-ek; PDBTitle: histocompatibility antigen 23 c2q6wD_ not modelled 23.3 19 PDB header:immune system Chain: D: PDB Molecule:hla class ii histocompatibility antigen, dr PDBTitle: the structure of hla-dra, drb3*0101 (dr52a) with bound2 platelet integrin peptide associated with fetal and3 neonatal alloimmune thrombocytopenia 24 c2kq0A_ not modelled 22.3 50 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: human nedd4 3rd ww domain complex with ebola zaire virus matrix2 protein vp40 derived peptide ilptappeymea 25 c1pqzA_ not modelled 21.6 19 PDB header:viral protein/immune system Chain: A: PDB Molecule:mcmv m144; PDBTitle: murine cytomegalovirus immunomodulatory protein m144 26 c2p24A_ not modelled 20.0 16 PDB header:immune system Chain: A: PDB Molecule:h-2 class ii histocompatibility antigen, a-u alpha chain; PDBTitle: i-au/mbp125-135 27 c3lqzA_ not modelled 18.7 22 PDB header:immune system Chain: A: PDB Molecule:hla class ii histocompatibility antigen, dp alpha 1 chain; PDBTitle: crystal structure of hla-dp2 28 d2jmfa1 not modelled 17.9 31 Fold:WW domain-like Superfamily:WW domain Family:WW domain 29 c2jmfA_ not modelled 17.6 33 PDB header:ligase/signaling protein Chain: A: PDB Molecule:e3 ubiquitin-protein ligase suppressor of deltex; PDBTitle: solution structure of the su(dx) ww4- notch py peptide2 complex 30 c2xm5A_ not modelled 17.1 29 PDB header:transferase Chain: A: PDB Molecule:cloq; PDBTitle: structural and mechanistic analysis of the magnesium-2 independent aromatic prenyltransferase cloq from the3 clorobiocin biosynthetic pathway 31 c2p24B_ not modelled 16.7 21 PDB header:immune system Chain: B: PDB Molecule:h-2 class ii histocompatibility antigen, a-u beta chain; PDBTitle: i-au/mbp125-135 32 c1ik9C_ not modelled 16.2 33 PDB header:gene regulation/ligase Chain: C: PDB Molecule:dna ligase iv; PDBTitle: crystal structure of a xrcc4-dna ligase iv complex 33 c1wr4A_ not modelled 16.0 23 PDB header:ligase Chain: A: PDB Molecule:ubiquitin-protein ligase nedd4-2; PDBTitle: solution structure of the second ww domain of nedd4-2 34 c1ymzA_ not modelled 15.8 15 PDB header:unknown function Chain: A: PDB Molecule:cc45; PDBTitle: cc45, an artificial ww domain designed using statistical2 coupling analysis 35 c1zhbJ_ not modelled 15.8 17 PDB header:immune system Chain: J: PDB Molecule:h-2 class i histocompatibility antigen, d-b PDBTitle: crystal structure of the murine class i major2 histocompatibility complex of h-2db, b2-microglobulin, and3 a 9-residue peptide derived from rat dopamine beta-4 monooxigenase 36 c2ez5W_ not modelled 15.5 40 PDB header:signalling protein,ligase Chain: W: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: solution structure of the dnedd4 ww3* domain- comm lpsy2 peptide complex 37 c2ysbA_ not modelled 15.0 38 PDB header:protein binding Chain: A: PDB Molecule:salvador homolog 1 protein; PDBTitle: solution structure of the first ww domain from the mouse2 salvador homolog 1 protein (sav1) 38 c1e0mA_ not modelled 15.0 23 PDB header:de novo protein Chain: A: PDB Molecule:wwprototype; PDBTitle: prototype ww domain 39 d1i5hw_ not modelled 14.8 27 Fold:WW domain-like Superfamily:WW domain Family:WW domain 40 c2zajA_ not modelled 14.7 25 PDB header:protein binding Chain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz PDBTitle: solution structure of the short-isoform of the second ww2 domain from the human membrane-associated guanylate kinase,3 ww and pdz domain-containing protein 1 (magi-1) 41 c2yshA_ not modelled 14.6 8 PDB header:protein binding Chain: A: PDB Molecule:growth-arrest-specific protein 7; PDBTitle: solution structure of the ww domain from the human growth-2 arrest-specific protein 7, gas-7 42 c1yiuA_ not modelled 14.6 42 PDB header:ligase Chain: A: PDB Molecule:itchy e3 ubiquitin protein ligase; PDBTitle: itch e3 ubiquitin ligase ww3 domain 43 c1v1cA_ not modelled 14.0 29 PDB header:sh3-domain Chain: A: PDB Molecule:obscurin; PDBTitle: solution structure of the sh3 domain of obscurin 44 d1tk7a2 not modelled 14.0 33 Fold:WW domain-like Superfamily:WW domain Family:WW domain 45 c1wmvA_ not modelled 13.0 46 PDB header:oxidoreductase, apoptosis Chain: A: PDB Molecule:ww domain containing oxidoreductase; PDBTitle: solution structure of the second ww domain of wwox 46 c3l4hA_ not modelled 13.0 38 PDB header:protein binding Chain: A: PDB Molecule:e3 ubiquitin-protein ligase hecw1; PDBTitle: helical box domain and second ww domain of the human e3 ubiquitin-2 protein ligase hecw1 47 c2clvA_ not modelled 12.9 16 PDB header:immune system Chain: A: PDB Molecule:h-2 class i histocompatibility antigen, k-b PDBTitle: mhc class i natural mutant h-2kbm8 heavy chain complexed2 with beta-2 microglobulin and pbm8 peptide 48 d1k9ra_ not modelled 12.9 25 Fold:WW domain-like Superfamily:WW domain Family:WW domain 49 c2ysgA_ not modelled 12.7 42 PDB header:protein binding Chain: A: PDB Molecule:syntaxin-binding protein 4; PDBTitle: solution structure of the ww domain from the human syntaxin-2 binding protein 4 50 c2dmvA_ not modelled 12.1 31 PDB header:ligase Chain: A: PDB Molecule:itchy homolog e3 ubiquitin protein ligase; PDBTitle: solution structure of the second ww domain of itchy homolog2 e3 ubiquitin protein ligase (itch) 51 c2djyA_ not modelled 11.7 27 PDB header:ligase/signaling protein Chain: A: PDB Molecule:smad ubiquitination regulatory factor 2; PDBTitle: solution structure of smurf2 ww3 domain-smad7 py peptide2 complex 52 c2lawA_ not modelled 11.6 23 PDB header:signaling protein/transcription Chain: A: PDB Molecule:yorkie homolog; PDBTitle: structure of the second ww domain from human yap in complex with a2 human smad1 derived peptide 53 c3zr8X_ not modelled 10.9 16 PDB header:protein binding Chain: X: PDB Molecule:avr3a11; PDBTitle: crystal structure of rxlr effector avr3a11 from phytophthora capsici 54 d2nnab1 not modelled 10.9 20 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C1 set domains (antibody constant domain-like) 55 c1wr7A_ not modelled 10.8 43 PDB header:ligase Chain: A: PDB Molecule:nedd4-2; PDBTitle: solution structure of the third ww domain of nedd4-2 56 d1tk7a1 not modelled 10.7 17 Fold:WW domain-like Superfamily:WW domain Family:WW domain 57 c2yscA_ not modelled 10.6 9 PDB header:protein binding Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family PDBTitle: solution structure of the ww domain from the human amyloid2 beta a4 precursor protein-binding family b member 3, apbb3 58 c2dwvB_ not modelled 10.5 17 PDB header:protein binding Chain: B: PDB Molecule:salvador homolog 1 protein; PDBTitle: solution structure of the second ww domain from mouse2 salvador homolog 1 protein (mww45) 59 c3zv0A_ not modelled 10.5 19 PDB header:cell cycle Chain: A: PDB Molecule:protein shq1; PDBTitle: structure of the shq1p-cbf5p complex 60 c2yf6A_ not modelled 10.2 19 PDB header:immune system Chain: A: PDB Molecule:major histocompatibility complex class i glycoprotein PDBTitle: complex of a b21 chicken mhc class i molecule and a 10mer2 chicken peptide 61 c3bzeA_ not modelled 10.2 17 PDB header:immune system Chain: A: PDB Molecule:hla class i histocompatibility antigen, alpha chain e; PDBTitle: the human non-classical major histocompatibility complex molecule hla-2 e 62 d1ynja1 not modelled 10.1 37 Fold:DCoH-like Superfamily:RBP11-like subunits of RNA polymerase Family:RNA polymerase alpha subunit dimerisation domain 63 c2ysfA_ not modelled 9.8 29 PDB header:protein binding Chain: A: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog; PDBTitle: solution structure of the fourth ww domain from the human2 e3 ubiquitin-protein ligase itchy homolog, itch 64 c1zt7C_ not modelled 9.5 16 PDB header:immune system Chain: C: PDB Molecule:h-2 class i histocompatibility antigen, k-k PDBTitle: crystal structure of class i mhc h-2kk in complex with a2 nonapeptide 65 c3ssbJ_ not modelled 9.1 41 PDB header:hydrolase/hydrolase inhibitor Chain: J: PDB Molecule:inducible metalloproteinase inhibitor protein; PDBTitle: structure of insect metalloproteinase inhibitor in complex with2 thermolysin 66 c1sebB_ not modelled 8.7 21 PDB header:complex (mhc ii/peptide/toxin) Chain: B: PDB Molecule:hla class ii histocompatibility antigen; PDBTitle: complex of the human mhc class ii glycoprotein hla-dr1 and2 the bacterial superantigen seb 67 c1ypzA_ not modelled 8.3 17 PDB header:immune system Chain: A: PDB Molecule:h2-t22 protein; PDBTitle: immune receptor 68 c2kykA_ not modelled 8.3 31 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog; PDBTitle: the sandwich region between two lmp2a py motif regulates the2 interaction between aip4ww2domain and py motif 69 d1twfj_ not modelled 8.3 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:RNA polymerase subunit RPB10 Family:RNA polymerase subunit RPB10 70 c3g27A_ not modelled 7.7 58 PDB header:protein binding Chain: A: PDB Molecule:82 prophage-derived uncharacterized protein ybco; PDBTitle: structure of a putative bacteriophage protein from escherichia coli2 str. k-12 substr. mg1655 71 c2le2B_ not modelled 7.7 26 PDB header:hydrolase inhibitor Chain: B: PDB Molecule:p56; PDBTitle: novel dimeric structure of phage phi29-encoded protein p56: insights2 into uracil-dna glycosylase inhibition 72 c3lqzB_ not modelled 7.6 19 PDB header:immune system Chain: B: PDB Molecule:hla-dp2 beta chain linked with dra peptide; PDBTitle: crystal structure of hla-dp2 73 c1s9vA_ not modelled 7.3 21 PDB header:immune system Chain: A: PDB Molecule:hla class ii histocompatibility antigen, dq(3) PDBTitle: crystal structure of hla-dq2 complexed with deamidated2 gliadin peptide 74 c1f3jD_ not modelled 7.1 17 PDB header:immune system Chain: D: PDB Molecule:h-2 class ii histocompatibility antigen; PDBTitle: histocompatibility antigen i-ag7 75 c2ysdA_ not modelled 6.8 40 PDB header:protein binding Chain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz PDBTitle: solution structure of the first ww domain from the human2 membrane-associated guanylate kinase, ww and pdz domain-3 containing protein 1. magi-1 76 d1xoda1 not modelled 6.8 11 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Enabled/VASP homology 1 domain (EVH1 domain) 77 c2kxqA_ not modelled 6.8 33 PDB header:protein binding Chain: A: PDB Molecule:e3 ubiquitin-protein ligase smurf2; PDBTitle: solution structure of smurf2 ww2 and ww3 bound to smad7 py motif2 containing peptide 78 c1p4lA_ not modelled 6.8 16 PDB header:immune system Chain: A: PDB Molecule:mhc class i h-2kb heavy chain; PDBTitle: crystal structure of nk receptor ly49c mutant with its mhc2 class i ligand h-2kb 79 c1cd1C_ not modelled 6.7 18 PDB header:cd1 Chain: C: PDB Molecule:cd1; PDBTitle: cd1(mouse) antigen presenting molecule 80 d1kn6a_ not modelled 6.4 24 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Prohormone convertase 1 pro-domain 81 c2l2lA_ not modelled 6.3 29 PDB header:transferase Chain: A: PDB Molecule:transcriptional repressor p66-alpha; PDBTitle: solution structure of the coiled-coil complex between mbd2 and2 p66alpha 82 c2fwoA_ not modelled 6.3 16 PDB header:immune system/viral protein Chain: A: PDB Molecule:h-2 class i histocompatibility antigen, k-d PDBTitle: mhc class i h-2kd heavy chain in complex with beta-2 2microglobulin and peptide derived from influenza3 nucleoprotein 83 c2j42A_ not modelled 6.2 22 PDB header:toxin Chain: A: PDB Molecule:c2 toxin component-ii; PDBTitle: low quality crystal structure of the transport component c2-2 ii of the c2-toxin from clostridium botulinum 84 d1bdfa1 not modelled 6.1 37 Fold:DCoH-like Superfamily:RBP11-like subunits of RNA polymerase Family:RNA polymerase alpha subunit dimerisation domain 85 d1mr1c_ not modelled 5.8 20 Fold:SAND domain-like Superfamily:SAND domain-like Family:SMAD4-binding domain of oncoprotein Ski 86 c1xz0A_ not modelled 5.7 18 PDB header:immune system Chain: A: PDB Molecule:t-cell surface glycoprotein cd1a; PDBTitle: crystal structure of cd1a in complex with a synthetic mycobactin2 lipopeptide 87 c2ysiA_ not modelled 5.6 8 PDB header:protein binding Chain: A: PDB Molecule:transcription elongation regulator 1; PDBTitle: solution structure of the first ww domain from the mouse2 transcription elongation regulator 1, transcription factor3 ca150 88 c2f0cC_ not modelled 5.4 20 PDB header:virus/viral protein Chain: C: PDB Molecule:phage tp901-1 orf49 (bpp); PDBTitle: structure of the receptor binding protein (orf49, bbp) from lactophage2 tp901-1 89 c1mwaH_ not modelled 5.2 16 PDB header:immune system Chain: H: PDB Molecule:h-2kbm3 mhc class i molecule heavy chain; PDBTitle: 2c/h-2kbm3/dev8 allogeneic complex 90 c1mwaI_ not modelled 5.2 16 PDB header:immune system Chain: I: PDB Molecule:h-2kbm3 mhc class i molecule heavy chain; PDBTitle: 2c/h-2kbm3/dev8 allogeneic complex 91 c1zt4C_ not modelled 5.2 18 PDB header:immune system Chain: C: PDB Molecule:t-cell surface glycoprotein cd1d; PDBTitle: the crystal structure of human cd1d with and without alpha-2 galactosylceramide 92 d1smya1 not modelled 5.2 37 Fold:DCoH-like Superfamily:RBP11-like subunits of RNA polymerase Family:RNA polymerase alpha subunit dimerisation domain 93 d1d5mb1 not modelled 5.2 21 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C1 set domains (antibody constant domain-like)