PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1pqzA_

Fold library id	PDB Header	Molecule	Title
c1pqzA_	PDB header: viral protein/immune system	Chain: A: PDB Molecule: mcmv m144;	PDBTitle: murine cytomegalovirus immunomodulatory protein m144

Links to external resources
Added to library: Tue Mar 16 12:01:44 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G S E S G L R Y A Y T L V V D G T A N T A R C F G T G H V D G E A F V G Y S N N K T H G I G R W V N A S H V E E E N K E F V R Q C K E L Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T T T T T T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E L D K M Q N N S A V I G V K T V Q L D V G C T S K I E K H Y A Y D G N E T E D D T A T S A S E R A R D C Q K K L T E Y R K L V L A S A V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S
S
S S S
T T
S S T T T T
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P Q L E V E R R S S G R E G G M R L R C F A R D Y Y P A D L E I R W W K D D G G G G A L P Q T S K Q H H D P L P S G Q G L Y Q K H I D V Y V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
B S S
S S S
S
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . .

Sequence D G G L E H V Y S C R V K G I A T G L E L Q I V R W K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G S G G G T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	E	S	G	L	R	Y	A	Y	T	L	V	V	D	G	T	A	N	T	A	R	C	F	G	T	G	H	V	D	G	E	A	F	V	G	Y	S	N	N	K	T	H	G	I	G	R	W	V	N	A	S	H	V	E	E	E	N	K	E	F	V	R	Q	C	K	E	L	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S											T	T	T												T	T								T	T						S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	L	D	K	M	Q	N	N	S	A	V	I	G	V	K	T	V	Q	L	D	V	G	C	T	S	K	I	E	K	H	Y	A	Y	D	G	N	E	T	E	D	D	T	A	T	S	A	S	E	R	A	R	D	C	Q	K	K	L	T	E	Y	R	K	L	V	L	A	S	A	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S		S	S		S											S	S	S								T	T										S	S	T	T	T																		T		B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	Q	L	E	V	E	R	R	S	S	G	R	E	G	G	M	R	L	R	C	F	A	R	D	Y	Y	P	A	D	L	E	I	R	W	W	K	D	D	G	G	G	G	A	L	P	Q	T	S	K	Q	H	H	D	P	L	P	S	G	Q	G	L	Y	Q	K	H	I	D	V	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S	S												B	S	S											S	S	S								S									S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Sequence	D	G	G	L	E	H	V	Y	S	C	R	V	K	G	I	A	T	G	L	E	L	Q	I	V	R	W	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		G	G	G							S	G	G	G	T	T