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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1ypzA_

Fold library idPDB HeaderMoleculeTitle
c1ypzA_PDB header: immune systemChain: A: PDB Molecule: h2-t22 protein;PDBTitle: immune receptor


Added to library: Tue Mar 16 11:57:28 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSHSLRYFYTAVSRPGLGEPWFIIVGYVDDMQVLRFSSKEETPRMAPWLEQEEADNWEQQTRIVTIQGQL
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Known secondary structure (DSSP)



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TT
BSS
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TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SERNLMTLVHFYNKSMDDSHTLQWLQGCDVEPDRHLCLWYNQLAYDSEDLPTLNENPSSCTVGNSTVPHI
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Known secondary structure (DSSP) TTT

TTS

GGGTSSSSB


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S




 .........150.........160.........170.........180.........190.........200.........210
Sequence SQDLKSHCSDLLQKYLEKGKERLLRSDPPKAHVTRHPRPEGDVTLRCWALGFYPADITLTWQLNGEELTQ
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Known secondary structure (DSSP)


TTTTTSS




B




SSS
SSS


SS
B
TT
 .........220.........230.........240.........250.........260
Sequence DMELVETRPAGDGTFQKWAAVVVPLGKEQSYTCHVYHEGLPEPLILRWGG
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Known secondary structure (DSSP) S



TTT
TTT
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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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