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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1zt4C_

Fold library idPDB HeaderMoleculeTitle
c1zt4C_PDB header: immune systemChain: C: PDB Molecule: t-cell surface glycoprotein cd1d;PDBTitle: the crystal structure of human cd1d with and without alpha-2 galactosylceramide


Added to library: Tue Mar 16 14:22:35 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PQRLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWETLQHIFRVY
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Known secondary structure (DSSP)






SSS
TT
TTSSS

STTTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence RSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNASNNFFHVAFQGKDILSFQGTSWEPTQEAPLWVNL
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Known secondary structure (DSSP) TT

S

SSS
TTTT
SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence AIQVLNQDKWTRETVQWLLNGTCPQFVSGLLESGKSELKKQVKPKAWLSRGPSPGPGRLLLVCHVSGFYP
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Known secondary structure (DSSP)
T







TTT

SS
 .........220.........230.........240.........250.........260.........270........
Sequence KPVWVKWMRGEQEQQGTQPGDILPNADETWYLRATLDVVAGEAAGLSCRVKHSSLEGQDIVLYWGGSY
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Known secondary structure (DSSP) S


TT
TT

TTS



TTS
TT

TT
SS



SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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