PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1xz0A_

Fold library id	PDB Header	Molecule	Title
c1xz0A_	PDB header: immune system	Chain: A: PDB Molecule: t-cell surface glycoprotein cd1a;	PDBTitle: crystal structure of cd1a in complex with a synthetic2 mycobactin lipopeptide

Links to external resources
Added to library: Tue Mar 16 13:27:19 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P L S F H V I W I A S F Y N H S W K Q N L V S G W L S D L Q T H T W D S N S S T I V F L W P W S R G N F S N E E W K E L E T L F R I R T I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T T T T T S S G G G G T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S F E G I R R Y A H E L Q F E Y P F E I Q V T G G C E L H S G K V S G S F L Q L A Y Q G S D F V S F Q N N S W L P Y P V A G N M A K H F C K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S T T T T T T
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V L N Q N Q H E N D I T H N L L S D T C P R F I L G L L D A G K A H L Q R Q V K P E A W L S H G P S P G P G H L Q L V C H V S G F Y P K P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
B
S T T B S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 .

Sequence W V M W M R G E Q E Q Q G T Q R G D I L P S A D G T W Y L R A T L E V A A G E A A D L S C R V K H S S L E G Q D I V L Y W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T S
G G G
T T
G G G T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	L	S	F	H	V	I	W	I	A	S	F	Y	N	H	S	W	K	Q	N	L	V	S	G	W	L	S	D	L	Q	T	H	T	W	D	S	N	S	S	T	I	V	F	L	W	P	W	S	R	G	N	F	S	N	E	E	W	K	E	L	E	T	L	F	R	I	R	T	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	S											T	T								T	T	T	T					S	S	G	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	F	E	G	I	R	R	Y	A	H	E	L	Q	F	E	Y	P	F	E	I	Q	V	T	G	G	C	E	L	H	S	G	K	V	S	G	S	F	L	Q	L	A	Y	Q	G	S	D	F	V	S	F	Q	N	N	S	W	L	P	Y	P	V	A	G	N	M	A	K	H	F	C	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T			S	S													T	T												T	T								T	T						G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	L	N	Q	N	Q	H	E	N	D	I	T	H	N	L	L	S	D	T	C	P	R	F	I	L	G	L	L	D	A	G	K	A	H	L	Q	R	Q	V	K	P	E	A	W	L	S	H	G	P	S	P	G	P	G	H	L	Q	L	V	C	H	V	S	G	F	Y	P	K	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T													T					T			B													S	T	T												B	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Sequence	W	V	M	W	M	R	G	E	Q	E	Q	Q	G	T	Q	R	G	D	I	L	P	S	A	D	G	T	W	Y	L	R	A	T	L	E	V	A	A	G	E	A	A	D	L	S	C	R	V	K	H	S	S	L	E	G	Q	D	I	V	L	Y	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T				T	T										T	T	S												G	G	G		T	T								G	G	G	T	T