Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	T	V	T	R	P	R	A	E	R	G	A	F	P	P	G	T	E	H	Y	G	R	S	L	L	G	A	P	L	I	W	F	P	A	P	A	A	S	R	E	S	G	L	I	L	A	G	T	H	G	D	E	N	S	S	V	V	T	L	S
Secondary structure
SS confidence
Disorder		?	?	?	?	?				?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		C	A	L	R	T	L	T	P	S	L	R	R	H	H	V	V	L	C	V	N	P	D	G	C	Q	L	G	L	R	A	N	A	N	G	V	D	L	N	R	N	F	P	A	A	N	W	K	E	G	E	T	V	Y	R	W	N	S	A	A	E
Secondary structure
SS confidence
Disorder																																														?					?					?		?	?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		E	R	D	V	V	L	L	T	G	D	K	P	G	S	E	P	E	T	Q	A	L	C	Q	L	I	H	R	I	Q	P	A	W	V	V	S	F	H	D	P	L	A	C	I	E	D	P	R	H	S	E	L	G	E	W	L	A	Q	A	F	E
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		L	P	L	V	T	S	V	G	Y	E	T	P	G	S	F	G	S	W	C	A	D	L	N	L	H	C	I	T	A	E	F	P	P	I	S	S	D	E	A	S	E	K	Y	L	F	A	M	A	N	L	L	R	W	H	P	K	D	A	I	R
Secondary structure
SS confidence
Disorder							?																													?		?		?																	?	?	?	?	?
Disorder confidence
		.	.
Sequence		P	S
Secondary structure
SS confidence
Disorder		?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3dgv chain B Region: 17 - 233 Aligned: 210 Modelled: 217 Confidence: 100.0% Identity: 26% PDB header:hydrolase Chain: B: PDB Molecule:carboxypeptidase b2; PDBTitle: crystal structure of thrombin activatable fibrinolysis inhibitor2 (tafi) Phyre2 PDB 2nsm chain A Region: 17 - 229 Aligned: 209 Modelled: 210 Confidence: 100.0% Identity: 26% PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase n catalytic chain; PDBTitle: crystal structure of the human carboxypeptidase n (kininase i)2 catalytic domain Phyre2 PDB 1aye chain A Region: 17 - 233 Aligned: 209 Modelled: 217 Confidence: 100.0% Identity: 18% PDB header:serine protease Chain: A: PDB Molecule:procarboxypeptidase a2; PDBTitle: human procarboxypeptidase a2 Phyre2 PDB 2boa chain B Region: 17 - 233 Aligned: 209 Modelled: 217 Confidence: 100.0% Identity: 20% PDB header:hydrolase Chain: B: PDB Molecule:carboxypeptidase a4; PDBTitle: human procarboxypeptidase a4. Phyre2 PDB 1nsa chain A Region: 17 - 233 Aligned: 209 Modelled: 217 Confidence: 100.0% Identity: 21% PDB header:serine protease Chain: A: PDB Molecule:procarboxypeptidase b; PDBTitle: three-dimensional structure of porcine procarboxypeptidase2 b: a structural basis of its inactivity Phyre2 PDB 1jqg chain A Region: 17 - 232 Aligned: 207 Modelled: 215 Confidence: 100.0% Identity: 23% PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase a; PDBTitle: crystal structure of the carboxypeptidase a from2 helicoverpa armigera Phyre2 PDB 1uwy chain A Region: 17 - 229 Aligned: 190 Modelled: 191 Confidence: 100.0% Identity: 27% PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase m; PDBTitle: crystal structure of human carboxypeptidase m Phyre2 PDB 1h8l chain A Region: 17 - 229 Aligned: 190 Modelled: 191 Confidence: 100.0% Identity: 23% PDB header:carboxypeptidase Chain: A: PDB Molecule:carboxypeptidase gp180 residues 503-882; PDBTitle: duck carboxypeptidase d domain ii in complex with gemsa Phyre2 PDB 3mn8 chain A Region: 17 - 229 Aligned: 188 Modelled: 189 Confidence: 100.0% Identity: 29% PDB header:hydrolase Chain: A: PDB Molecule:lp15968p; PDBTitle: structure of drosophila melanogaster carboxypeptidase d isoform 1b2 short Phyre2 PDB 1aye chain A domain 1 Region: 17 - 235 Aligned: 211 Modelled: 219 Confidence: 100.0% Identity: 21% Fold: Phosphorylase/hydrolase-like Superfamily: Zn-dependent exopeptidases Family: Pancreatic carboxypeptidases Phyre2 PDB 1nsa chain A domain 1 Region: 17 - 232 Aligned: 208 Modelled: 216 Confidence: 100.0% Identity: 18% Fold: Phosphorylase/hydrolase-like Superfamily: Zn-dependent exopeptidases Family: Pancreatic carboxypeptidases Phyre2 PDB 1uwy chain A domain 2 Region: 17 - 233 Aligned: 194 Modelled: 195 Confidence: 100.0% Identity: 26% Fold: Phosphorylase/hydrolase-like Superfamily: Zn-dependent exopeptidases Family: Pancreatic carboxypeptidases Phyre2 PDB 1obr chain A Region: 17 - 233 Aligned: 210 Modelled: 217 Confidence: 100.0% Identity: 23% Fold: Phosphorylase/hydrolase-like Superfamily: Zn-dependent exopeptidases Family: Carboxypeptidase T Phyre2 PDB 1kwm chain A domain 1 Region: 17 - 231 Aligned: 207 Modelled: 215 Confidence: 100.0% Identity: 19% Fold: Phosphorylase/hydrolase-like Superfamily: Zn-dependent exopeptidases Family: Pancreatic carboxypeptidases Phyre2 PDB 1jqg chain A domain 1 Region: 17 - 232 Aligned: 207 Modelled: 215 Confidence: 100.0% Identity: 24% Fold: Phosphorylase/hydrolase-like Superfamily: Zn-dependent exopeptidases Family: Pancreatic carboxypeptidases Phyre2 PDB 1z5r chain A domain 1 Region: 17 - 231 Aligned: 207 Modelled: 207 Confidence: 100.0% Identity: 19% Fold: Phosphorylase/hydrolase-like Superfamily: Zn-dependent exopeptidases Family: Pancreatic carboxypeptidases Phyre2 PDB 1m4l chain A Region: 17 - 233 Aligned: 209 Modelled: 217 Confidence: 100.0% Identity: 20% Fold: Phosphorylase/hydrolase-like Superfamily: Zn-dependent exopeptidases Family: Pancreatic carboxypeptidases Phyre2 PDB 2bo9 chain A domain 1 Region: 17 - 232 Aligned: 208 Modelled: 216 Confidence: 100.0% Identity: 20% Fold: Phosphorylase/hydrolase-like Superfamily: Zn-dependent exopeptidases Family: Pancreatic carboxypeptidases Phyre2 PDB 3d4u chain A Region: 17 - 231 Aligned: 206 Modelled: 213 Confidence: 100.0% Identity: 25% PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:carboxypeptidase b2; PDBTitle: bovine thrombin-activatable fibrinolysis inhibitor (tafia) in complex2 with tick-derived carboxypeptidase inhibitor. Phyre2 PDB 2c1c chain A domain 1 Region: 17 - 232 Aligned: 208 Modelled: 216 Confidence: 100.0% Identity: 23% Fold: Phosphorylase/hydrolase-like Superfamily: Zn-dependent exopeptidases Family: Pancreatic carboxypeptidases Phyre2 PDB 1cpb chain A Region: 5 - 65 Aligned: 61 Modelled: 61 Confidence: 99.1% Identity: 16% PDB header:hydrolase (c-terminal peptidase) Chain: A: PDB Molecule:carboxypeptidase b; PDBTitle: structure of carboxypeptidase b at 2.8 angstroms resolution Phyre2 1 c3dgvB_ 2 c2nsmA_ 3 c1ayeA_ 4 c2boaB_ 5 c1nsaA_ 6 c1jqgA_ 7 c1uwyA_ 8 c1h8lA_ 9 c3mn8A_ 10 d1ayea1 11 d1nsaa1 12 d1uwya2 13 d1obra_ 14 d1kwma1 15 d1jqga1 16 d1z5ra1 17 d1m4la_ 18 d2bo9a1 19 c3d4uA_ 20 d2c1ca1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 c1cpbA_ 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3dgvB_ 100.0 26 PDB header:hydrolase Chain: B: PDB Molecule:carboxypeptidase b2; PDBTitle: crystal structure of thrombin activatable fibrinolysis inhibitor2 (tafi) 2 c2nsmA_ 100.0 26 PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase n catalytic chain; PDBTitle: crystal structure of the human carboxypeptidase n (kininase i)2 catalytic domain 3 c1ayeA_ 100.0 18 PDB header:serine protease Chain: A: PDB Molecule:procarboxypeptidase a2; PDBTitle: human procarboxypeptidase a2 4 c2boaB_ 100.0 20 PDB header:hydrolase Chain: B: PDB Molecule:carboxypeptidase a4; PDBTitle: human procarboxypeptidase a4. 5 c1nsaA_ 100.0 21 PDB header:serine protease Chain: A: PDB Molecule:procarboxypeptidase b; PDBTitle: three-dimensional structure of porcine procarboxypeptidase2 b: a structural basis of its inactivity 6 c1jqgA_ 100.0 23 PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase a; PDBTitle: crystal structure of the carboxypeptidase a from2 helicoverpa armigera 7 c1uwyA_ 100.0 27 PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase m; PDBTitle: crystal structure of human carboxypeptidase m 8 c1h8lA_ 100.0 23 PDB header:carboxypeptidase Chain: A: PDB Molecule:carboxypeptidase gp180 residues 503-882; PDBTitle: duck carboxypeptidase d domain ii in complex with gemsa 9 c3mn8A_ 100.0 29 PDB header:hydrolase Chain: A: PDB Molecule:lp15968p; PDBTitle: structure of drosophila melanogaster carboxypeptidase d isoform 1b2 short 10 d1ayea1 100.0 21 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Pancreatic carboxypeptidases 11 d1nsaa1 100.0 18 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Pancreatic carboxypeptidases 12 d1uwya2 100.0 26 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Pancreatic carboxypeptidases 13 d1obra_ 100.0 23 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Carboxypeptidase T 14 d1kwma1 100.0 19 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Pancreatic carboxypeptidases 15 d1jqga1 100.0 24 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Pancreatic carboxypeptidases 16 d1z5ra1 100.0 19 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Pancreatic carboxypeptidases 17 d1m4la_ 100.0 20 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Pancreatic carboxypeptidases 18 d2bo9a1 100.0 20 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Pancreatic carboxypeptidases 19 c3d4uA_ 100.0 25 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:carboxypeptidase b2; PDBTitle: bovine thrombin-activatable fibrinolysis inhibitor (tafia) in complex2 with tick-derived carboxypeptidase inhibitor. 20 d2c1ca1 100.0 23 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Pancreatic carboxypeptidases 21 d1h8la2 not modelled 100.0 24 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Pancreatic carboxypeptidases 22 c3k2kA_ not modelled 100.0 23 PDB header:hydrolase Chain: A: PDB Molecule:putative carboxypeptidase; PDBTitle: crystal structure of putative carboxypeptidase (yp_103406.1) from2 burkholderia mallei atcc 23344 at 2.49 a resolution 23 c3l2nA_ not modelled 100.0 23 PDB header:hydrolase Chain: A: PDB Molecule:peptidase m14, carboxypeptidase a; PDBTitle: crystal structure of putative carboxypeptidase a (yp_562911.1) from2 shewanella denitrificans os-217 at 2.39 a resolution 24 c1cpbB_ not modelled 100.0 18 PDB header:hydrolase (c-terminal peptidase) Chain: B: PDB Molecule:carboxypeptidase b; PDBTitle: structure of carboxypeptidase b at 2.8 angstroms resolution 25 c3cdxB_ not modelled 100.0 23 PDB header:hydrolase Chain: B: PDB Molecule:succinylglutamatedesuccinylase/aspartoacylase; PDBTitle: crystal structure of2 succinylglutamatedesuccinylase/aspartoacylase from3 rhodobacter sphaeroides 26 c3b2yB_ not modelled 99.9 24 PDB header:hydrolase Chain: B: PDB Molecule:metallopeptidase containing co-catalytic metalloactive PDBTitle: crystal structure of a putative metallopeptidase (sden_2526) from2 shewanella denitrificans os217 at 1.74 a resolution 27 c3na6A_ not modelled 99.9 21 PDB header:hydrolase Chain: A: PDB Molecule:succinylglutamate desuccinylase/aspartoacylase; PDBTitle: crystal structure of a succinylglutamate desuccinylase (tm1040_2694)2 from silicibacter sp. tm1040 at 2.00 a resolution 28 c2qvpC_ not modelled 99.9 23 PDB header:hydrolase Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative metallopeptidase (sama_0725) from2 shewanella amazonensis sb2b at 2.00 a resolution 29 c3fmcC_ not modelled 99.9 17 PDB header:hydrolase Chain: C: PDB Molecule:putative succinylglutamate desuccinylase / aspartoacylase; PDBTitle: crystal structure of a putative succinylglutamate desuccinylase /2 aspartoacylase family protein (sama_0604) from shewanella amazonensis3 sb2b at 1.80 a resolution 30 c2qj8B_ not modelled 99.9 22 PDB header:hydrolase Chain: B: PDB Molecule:mlr6093 protein; PDBTitle: crystal structure of an aspartoacylase family protein (mlr6093) from2 mesorhizobium loti maff303099 at 2.00 a resolution 31 d1yw4a1 not modelled 99.8 21 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:AstE/AspA-like 32 d2gu2a1 not modelled 99.8 17 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:AstE/AspA-like 33 d2i3ca1 not modelled 99.8 18 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:AstE/AspA-like 34 c3nh8A_ not modelled 99.8 16 PDB header:hydrolase Chain: A: PDB Molecule:aspartoacylase-2; PDBTitle: crystal structure of murine aminoacylase 3 in complex with n-acetyl-s-2 1,2-dichlorovinyl-l-cysteine 35 d1yw6a1 not modelled 99.8 25 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:AstE/AspA-like 36 d2g9da1 not modelled 99.8 18 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:AstE/AspA-like 37 d2bcoa1 not modelled 99.7 16 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:AstE/AspA-like 38 c1cpbA_ 99.1 16 PDB header:hydrolase (c-terminal peptidase) Chain: A: PDB Molecule:carboxypeptidase b; PDBTitle: structure of carboxypeptidase b at 2.8 angstroms resolution 39 d2odfa1 not modelled 93.2 18 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:FGase-like 40 c1xovA_ not modelled 86.1 17 PDB header:hydrolase Chain: A: PDB Molecule:ply protein; PDBTitle: the crystal structure of the listeria monocytogenes bacteriophage psa2 endolysin plypsa 41 d1jwqa_ not modelled 82.2 10 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:N-acetylmuramoyl-L-alanine amidase-like 42 d1xova2 not modelled 82.0 14 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:N-acetylmuramoyl-L-alanine amidase-like 43 d2q7sa1 not modelled 80.5 13 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:FGase-like 44 c3czxA_ not modelled 78.9 15 PDB header:hydrolase Chain: A: PDB Molecule:putative n-acetylmuramoyl-l-alanine amidase; PDBTitle: the crystal structure of the putative n-acetylmuramoyl-l-2 alanine amidase from neisseria meningitidis 45 c1jd7A_ not modelled 76.5 17 PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase; PDBTitle: crystal structure analysis of the mutant k300r of2 pseudoalteromonas haloplanctis alpha-amylase 46 c3qayC_ not modelled 69.1 6 PDB header:lyase Chain: C: PDB Molecule:endolysin; PDBTitle: catalytic domain of cd27l endolysin targeting clostridia difficile 47 c1jaeA_ not modelled 50.2 17 PDB header:glycosidase Chain: A: PDB Molecule:alpha-amylase; PDBTitle: structure of tenebrio molitor larval alpha-amylase 48 c1bdeA_ not modelled 36.0 26 PDB header:aids Chain: A: PDB Molecule:vpr protein; PDBTitle: helical structure of polypeptides from the c-terminal half2 of hiv-1 vpr, nmr, 20 structures 49 d1g94a2 not modelled 34.3 17 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 50 c1dsjA_ not modelled 31.0 28 PDB header:viral peptide Chain: A: PDB Molecule:vpr protein; PDBTitle: nmr solution structure of vpr50_75, 20 structures 51 c3gaaB_ not modelled 30.9 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein ta1441; PDBTitle: the crystal structure of the protein with unknown function from2 thermoplasma acidophilum 52 d1jaea2 not modelled 23.0 17 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 53 d1g5ba_ not modelled 19.4 15 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 54 c2wamB_ not modelled 17.3 13 PDB header:unknown function Chain: B: PDB Molecule:conserved hypothetical alanine and leucine rich PDBTitle: crystal structure of mycobacterium tuberculosis unknown2 function protein rv2714 55 d1mtza_ not modelled 17.0 18 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Proline iminopeptidase-like 56 c3ne8A_ not modelled 14.7 13 PDB header:hydrolase Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase; PDBTitle: the crystal structure of a domain from n-acetylmuramoyl-l-alanine2 amidase of bartonella henselae str. houston-1 57 c2xt0A_ not modelled 14.3 18 PDB header:hydrolase Chain: A: PDB Molecule:haloalkane dehalogenase; PDBTitle: dehalogenase dppa from plesiocystis pacifica sir-i 58 c3mnfA_ not modelled 14.0 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:pac2 family protein; PDBTitle: crystal structure of pac2 family protein from streptomyces avermitilis2 ma 59 d2p90a1 not modelled 13.0 11 Fold:Phosphorylase/hydrolase-like Superfamily:Cgl1923-like Family:Cgl1923-like 60 c3blpX_ not modelled 11.6 19 PDB header:hydrolase Chain: X: PDB Molecule:alpha-amylase 1; PDBTitle: role of aromatic residues in human salivary alpha-amylase 61 d1b6ga_ not modelled 11.4 14 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Haloalkane dehalogenase 62 c1tjnA_ not modelled 10.5 33 PDB header:lyase Chain: A: PDB Molecule:sirohydrochlorin cobaltochelatase; PDBTitle: crystal structure of hypothetical protein af0721 from archaeoglobus2 fulgidus 63 d1tjna_ not modelled 10.5 33 Fold:Chelatase-like Superfamily:Chelatase Family:CbiX-like 64 d1v6ta_ not modelled 9.5 22 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:LamB/YcsF-like 65 d2b3ya2 not modelled 8.4 16 Fold:Aconitase iron-sulfur domain Superfamily:Aconitase iron-sulfur domain Family:Aconitase iron-sulfur domain 66 c3dddA_ not modelled 8.4 13 PDB header:transferase Chain: A: PDB Molecule:putative acetyltransferase; PDBTitle: crystal structure of a putative acetyltransferase (np_142035.1) from2 pyrococcus horikoshii at 2.25 a resolution 67 c2xnsC_ not modelled 8.3 31 PDB header:hydrolase/peptide Chain: C: PDB Molecule:regulator of g-protein signaling 14; PDBTitle: crystal structure of human g alpha i1 bound to a designed helical2 peptide derived from the goloco motif of rgs14 68 d1uf3a_ not modelled 8.2 12 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TT1561-like 69 c1m8lA_ not modelled 7.8 32 PDB header:viral protein Chain: A: PDB Molecule:vpr protein; PDBTitle: nmr structure of the hiv-1 regulatory protein vpr 70 d3ck2a1 not modelled 7.5 9 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 71 c3d3kD_ not modelled 7.1 13 PDB header:protein binding Chain: D: PDB Molecule:enhancer of mrna-decapping protein 3; PDBTitle: crystal structure of human edc3p 72 d1e6ua_ not modelled 6.8 22 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 73 c2e2xA_ not modelled 6.6 29 PDB header:signaling protein Chain: A: PDB Molecule:neurofibromin; PDBTitle: sec14 homology module of neurofibromin in complex with2 phosphatitylethanolamine 74 c3qfnA_ not modelled 6.4 19 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of streptococcal asymmetric ap4a hydrolase and2 phosphodiesterase spr1479/saph in complex with inorganic phosphate 75 d1z6za1 not modelled 6.1 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 76 c1n7gB_ not modelled 6.1 26 PDB header:lyase Chain: B: PDB Molecule:gdp-d-mannose-4,6-dehydratase; PDBTitle: crystal structure of the gdp-mannose 4,6-dehydratase2 ternary complex with nadph and gdp-rhamnose. 77 c3e35A_ not modelled 6.1 19 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein sco1997; PDBTitle: actinobacteria-specific protein of unknown function, sco1997 78 c1zoiC_ not modelled 5.8 9 PDB header:hydrolase Chain: C: PDB Molecule:esterase; PDBTitle: crystal structure of a stereoselective esterase from2 pseudomonas putida ifo12996 79 c2x0dA_ not modelled 5.8 6 PDB header:transferase Chain: A: PDB Molecule:wsaf; PDBTitle: apo structure of wsaf 80 c2p90B_ not modelled 5.6 11 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein cgl1923; PDBTitle: the crystal structure of a protein of unknown function from2 corynebacterium glutamicum atcc 13032 81 d1n7ha_ not modelled 5.6 21 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 82 c2qjcA_ not modelled 5.6 20 PDB header:hydrolase Chain: A: PDB Molecule:diadenosine tetraphosphatase, putative; PDBTitle: crystal structure of a putative diadenosine tetraphosphatase 83 c2ockA_ not modelled 5.3 12 PDB header:hydrolase Chain: A: PDB Molecule:valacyclovir hydrolase; PDBTitle: crystal structure of valacyclovir hydrolase d123n mutant

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0