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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3blpX_

Fold library idPDB HeaderMoleculeTitle
c3blpX_PDB header: hydrolaseChain: X: PDB Molecule: alpha-amylase 1;PDBTitle: role of aromatic residues in human salivary alpha-amylase


Added to library: Tue Mar 16 12:43:35 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVSYKLCT
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Known secondary structure (DSSP)





TT

TT

TTTTTT




S
BB

TTTTS
GGGGGSBS
S
S
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence RSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKC
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Known secondary structure (DSSP) TTB
TT


STTS
SBS
BTT


BBGGGTBBTTTTB
GGGBSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KTGSGDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAIL
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Known secondary structure (DSSP)
SSSSB


TT
SBBTTB
TTST

TTGGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWG
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Known secondary structure (DSSP) TT




TTTS
TT







SSSS

GGGGTTTS
T
TT

GGGGGGTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWPRYFENG
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Known secondary structure (DSSP) GGGT


TTT
S

TTGGGT
TT

TT


GGGS
SS
B




TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRARQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGR
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Known secondary structure (DSSP) TTTT

SSTT



B
TTS
B
TTB

GGGSTTT


SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIH
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Known secondary structure (DSSP) TTT
SSS




S
TTT

TTSS

TTS
TT
SS
 .....
Sequence AESKL
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Known secondary structure (DSSP) GGGB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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