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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1cpbB_ | PDB header: hydrolase (c-terminal peptidase) | Chain: B: PDB Molecule: carboxypeptidase b; | PDBTitle: structure of carboxypeptidase b at 2.8 angstroms resolution |
Added to library: Tue Mar 16 13:24:52 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | E | I | H | M | T | E | F | L | D | K | L | D | F | Y | V | L | P | V | V | N | I | D | G | Y | I | Y | T | W | T | T | N | R | M | W | R | K | T | R | S | T | R | A | G | S | S | C | T | G | T | D | L | N | R | N | F | D | A | G | W | C | S | I | G | A | S | N | N | P | C | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | ![]() | T | T | S | B | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | T | T | S | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | S | T | T | S | T | T | S | B | S | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | E | T | Y | C | G | S | A | A | E | S | E | K | E | S | K | A | V | A | D | F | I | R | N | H | L | S | I | K | A | Y | L | T | I | H | S | Y | S | Q | M | M | L | Y | P | Y | S | Y | D | Y | K | L | P | K | N | N | V | E | L | N | T | L | A | K | G | A | V | K | K | L | A | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | B | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | G | G | G | ![]() | ![]() | ![]() | S | S | B | ![]() | ![]() | S | S | T | T | S | S | S | S | S | S | S | ![]() | ![]() | S | S | S | S | S | S | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | L | H | G | T | T | Y | S | Y | G | P | G | A | T | T | I | Y | P | A | S | G | G | S | D | D | W | A | Y | D | Q | G | I | K | Y | S | F | T | F | E | L | R | D | K | G | R | Y | G | F | V | L | P | E | S | Q | I | Q | P | T | C | E | E | T | M | L | A | I | K | Y | V | T | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | B | S | S | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | T | T | ![]() | ![]() | ![]() | T | T | S | S | S | S | S | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | S | S | B | T | T | B | S |   | . | . | . | . | . | . | |||||||||||
Sequence | Y | V | L | E | H | L | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | B |
Download: | PDB structure | FASTA sequence |
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