Fold library entry viewer: c1jd7A_

Added to library: Tue Mar 16 12:26:32 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	P	T	T	F	V	H	L	F	E	W	N	W	Q	D	V	A	Q	E	C	E	Q	Y	L	G	P	K	G	Y	A	A	V	Q	V	S	P	P	N	E	H	I	T	G	S	Q	W	W	T	R	Y	Q	P	V	S	Y	E	L	Q	S	R	G	G	N	R	A	Q	F	I	D	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T													T					T										S		B	B		S	S	S	G	G	G	G	G	S	B	S		S	S	S		B	T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	N	R	C	S	A	A	G	V	D	I	Y	V	D	T	L	I	N	H	M	A	A	G	S	G	T	G	T	A	G	N	S	F	G	N	K	S	F	P	I	Y	S	P	Q	D	F	H	E	S	C	T	I	N	N	S	D	Y	G	N	D	R	Y	R	V	Q	N	C	E	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T										S				S	S				B	T	T	S				B	T	T	B		S	S			G	G	G	B					B																S	B	B	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	L	A	D	L	D	T	A	S	N	Y	V	Q	N	T	I	A	A	Y	I	N	D	L	Q	A	I	G	V	K	G	F	R	F	D	A	S	K	H	V	A	A	S	D	I	Q	S	L	M	A	K	V	N	G	S	P	V	V	F	Q	E	V	I	D	Q	G	G	E	A	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B			B		T	T	S																		T								T	G	G	G	S										T	T	S		S												S	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	S	E	Y	L	S	T	G	L	V	T	E	F	K	Y	S	T	E	L	G	N	T	F	R	N	G	S	L	A	W	L	S	N	F	G	E	G	W	G	F	M	P	S	S	S	A	V	V	F	V	D	N	H	D	N	Q	R	G	H	G	G	A	G	N	V	I	T	F	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G	T	T	T	S																		S		G	G	G	G	G	G		S	G	G	G	T				G	G	G					S			T	T	G	G	G	T	S	S			T	T	S			G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	R	L	Y	D	L	A	N	V	F	M	L	A	Y	P	Y	G	Y	P	R	V	M	S	S	Y	D	F	H	G	D	T	D	A	G	G	P	N	V	P	V	H	N	N	G	N	L	E	C	F	A	S	N	W	K	C	E	H	R	W	S	Y	I	A	G	G	V	D	F	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													S			S								B			T	T		T	T					S	S		S			T	T				B	S	S	S	S	B			G	G	G	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	T	A	D	N	W	A	V	T	N	W	W	D	N	T	N	N	Q	I	S	F	G	R	G	S	S	G	H	M	A	I	N	K	E	D	S	T	L	T	A	T	V	Q	T	D	M	A	S	G	Q	Y	C	N	V	L	K	G	E	L	S	A	D	A	K	S	C	S	G	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T											S	S	S							G	G	G								S	S	S		B								S		S						T	T	T			B		T	T	S	S		B	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Sequence	I	T	V	N	S	D	G	T	I	N	L	N	I	G	A	W	D	A	M	A	I	H	K	N	A	K	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S						B		T	T							T	T	S	B

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PDB structure

FASTA sequence

Hidden Markov model

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