Email l.a.kelley@imperial.ac.uk Description P42630 Date Thu Jan 5 12:01:59 GMT 2012 Unique Job ID 5a29bc9d62e99a8c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2iafa1 100.0 43 Fold:FwdE/GAPDH domain-like Superfamily:Serine metabolism enzymes domain Family:Serine dehydratase beta chain-like 2 c1ygyA_ 99.7 14 PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of d-3-phosphoglycerate dehydrogenase from2 mycobacterium tuberculosis 3 d1ygya4 99.4 16 Fold:FwdE/GAPDH domain-like Superfamily:Serine metabolism enzymes domain Family:SerA intervening domain-like 4 c2hp0A_ 98.1 14 PDB header:isomerase Chain: A: PDB Molecule:ids-epimerase; PDBTitle: crystal structure of iminodisuccinate epimerase 5 d1szqa_ 97.6 15 Fold:2-methylcitrate dehydratase PrpD Superfamily:2-methylcitrate dehydratase PrpD Family:2-methylcitrate dehydratase PrpD 6 c3u4gA_ 58.6 31 PDB header:transferase Chain: A: PDB Molecule:namn:dmb phosphoribosyltransferase; PDBTitle: the structure of cobt from pyrococcus horikoshii 7 c3s1sA_ 36.0 31 PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi 8 d1ug2a_ 34.1 23 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 9 d2i7pa1 31.2 29 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Fumble-like 10 d1no5a_ 27.2 22 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 11 c2kelB_ 24.3 19 PDB header:transcription repressor Chain: B: PDB Molecule:uncharacterized protein 56b; PDBTitle: structure of the transcription regulator svtr from the2 hyperthermophilic archaeal virus sirv1 12 c2rkbE_ 21.8 14 PDB header:lyase Chain: E: PDB Molecule:serine dehydratase-like; PDBTitle: serine dehydratase like-1 from human cancer cells 13 c1knyA_ 21.7 20 PDB header:transferase Chain: A: PDB Molecule:kanamycin nucleotidyltransferase; PDBTitle: kanamycin nucleotidyltransferase 14 c1yy3A_ 18.2 57 PDB header:isomerase Chain: A: PDB Molecule:s-adenosylmethionine:trna ribosyltransferase- PDBTitle: structure of s-adenosylmethionine:trna ribosyltransferase-2 isomerase (quea) 15 c2rffA_ 15.6 19 PDB header:transferase Chain: A: PDB Molecule:putative nucleotidyltransferase; PDBTitle: crystal structure of a putative nucleotidyltransferase2 (np_343093.1) from sulfolobus solfataricus at 1.40 a3 resolution 16 d1knya2 15.5 20 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Kanamycin nucleotidyltransferase (KNTase), N-terminal domain 17 d1jb0l_ 14.5 35 Fold:Photosystem I reaction center subunit XI, PsaL Superfamily:Photosystem I reaction center subunit XI, PsaL Family:Photosystem I reaction center subunit XI, PsaL 18 c2k9iB_ 14.3 14 PDB header:dna binding protein Chain: B: PDB Molecule:plasmid prn1, complete sequence; PDBTitle: nmr structure of plasmid copy control protein orf56 from2 sulfolobus islandicus 19 c2zfdB_ 12.6 24 PDB header:signaling protein/transferase Chain: B: PDB Molecule:putative uncharacterized protein t20l15_90; PDBTitle: the crystal structure of plant specific calcium binding protein atcbl22 in complex with the regulatory domain of atcipk14 20 c2k3qA_ 11.6 22 PDB header:structural protein Chain: A: PDB Molecule:tusp1; PDBTitle: solution structure of the n-terminal domain (tusp1-n) of the2 egg case silk from nephila antipodiana 21 c2ddhA_ not modelled 11.2 38 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: crystal structure of acyl-coa oxidase complexed with 3-oh-dodecanoate 22 d1h72c1 not modelled 11.2 27 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:GHMP Kinase, N-terminal domain 23 c3lr6A_ not modelled 10.9 33 PDB header:structural protein Chain: A: PDB Molecule:major ampullate spidroin 1; PDBTitle: self-assembly of spider silk proteins is controlled by a ph-sensitive2 relay 24 d1gg2g_ not modelled 10.5 25 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Transducin (heterotrimeric G protein), gamma chain Family:Transducin (heterotrimeric G protein), gamma chain 25 d1ylqa1 not modelled 10.4 28 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 26 c2fonA_ not modelled 10.2 25 PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal acyl-coa oxidase 1a; PDBTitle: x-ray crystal structure of leacx1, an acyl-coa oxidase from2 lycopersicon esculentum (tomato) 27 c1u9pA_ not modelled 10.2 17 PDB header:unknown function Chain: A: PDB Molecule:parc; PDBTitle: permuted single-chain arc 28 c1qoyA_ not modelled 10.1 10 PDB header:toxin Chain: A: PDB Molecule:hemolysin e; PDBTitle: e.coli hemolysin e (hlye, clya, shea) 29 c3mwdA_ not modelled 10.0 31 PDB header:transferase Chain: A: PDB Molecule:atp-citrate synthase; PDBTitle: truncated human atp-citrate lyase with citrate bound 30 c1k97A_ not modelled 10.0 12 PDB header:ligase Chain: A: PDB Molecule:argininosuccinate synthase; PDBTitle: crystal structure of e. coli argininosuccinate synthetase in complex2 with aspartate and citrulline 31 d1k61a_ not modelled 9.8 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 32 d1b65a_ not modelled 9.4 17 Fold:DmpA/ArgJ-like Superfamily:DmpA/ArgJ-like Family:DmpA-like 33 d1wota_ not modelled 9.3 24 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 34 d1omwg_ not modelled 9.2 25 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Transducin (heterotrimeric G protein), gamma chain Family:Transducin (heterotrimeric G protein), gamma chain 35 c2fgyA_ not modelled 9.0 17 PDB header:lyase Chain: A: PDB Molecule:carboxysome shell polypeptide; PDBTitle: beta carbonic anhydrase from the carboxysomal shell of2 halothiobacillus neapolitanus (csosca) 36 d1j20a1 not modelled 8.8 14 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:N-type ATP pyrophosphatases 37 d1ee8a1 not modelled 8.8 13 Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Middle domain of MutM-like DNA repair proteins 38 c1uf2A_ not modelled 8.7 43 PDB header:virus Chain: A: PDB Molecule:core protein p3; PDBTitle: the atomic structure of rice dwarf virus (rdv) 39 d1uf2a_ not modelled 8.7 43 Fold:Reovirus inner layer core protein p3 Superfamily:Reovirus inner layer core protein p3 Family:Phytoreovirus core 40 d1xhmb1 not modelled 8.7 27 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Transducin (heterotrimeric G protein), gamma chain Family:Transducin (heterotrimeric G protein), gamma chain 41 c1xhmB_ not modelled 8.6 27 PDB header:signaling protein Chain: B: PDB Molecule:guanine nucleotide-binding protein g(i)/g(s) PDBTitle: the crystal structure of a biologically active peptide2 (sigk) bound to a g protein beta:gamma heterodimer 42 d1ncfb3 not modelled 8.6 40 Fold:TNF receptor-like Superfamily:TNF receptor-like Family:TNF receptor-like 43 c3ibqA_ not modelled 8.6 30 PDB header:transferase Chain: A: PDB Molecule:pyridoxal kinase; PDBTitle: crystal structure of pyridoxal kinase from lactobacillus2 plantarum in complex with atp 44 d1gotg_ not modelled 8.5 8 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Transducin (heterotrimeric G protein), gamma chain Family:Transducin (heterotrimeric G protein), gamma chain 45 d1rypa_ not modelled 8.3 7 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 46 c2w4eA_ not modelled 8.3 23 PDB header:hydrolase Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: structure of an n-terminally truncated nudix hydrolase2 dr2204 from deinococcus radiodurans 47 d1w32a_ not modelled 8.2 14 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 48 d1fi6a_ not modelled 8.0 20 Fold:EF Hand-like Superfamily:EF-hand Family:Eps15 homology domain (EH domain) 49 c2crnA_ not modelled 8.0 16 PDB header:immune system Chain: A: PDB Molecule:ubash3a protein; PDBTitle: solution structure of the uba domain of human ubash3a2 protein 50 d1tbge_ not modelled 7.9 8 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Transducin (heterotrimeric G protein), gamma chain Family:Transducin (heterotrimeric G protein), gamma chain 51 d1ng7a_ not modelled 7.9 27 Fold:Soluble domain of poliovirus core protein 3a Superfamily:Soluble domain of poliovirus core protein 3a Family:Soluble domain of poliovirus core protein 3a 52 c2dagA_ not modelled 7.8 12 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5; PDBTitle: solution structure of the first uba domain in the human2 ubiquitin specific protease 5 (isopeptidase 5) 53 d1n93x_ not modelled 7.8 24 Fold:P40 nucleoprotein Superfamily:P40 nucleoprotein Family:P40 nucleoprotein 54 c1n93X_ not modelled 7.8 24 PDB header:viral protein Chain: X: PDB Molecule:p40 nucleoprotein; PDBTitle: crystal structure of the borna disease virus nucleoprotein 55 c1kh2D_ not modelled 7.6 15 PDB header:ligase Chain: D: PDB Molecule:argininosuccinate synthetase; PDBTitle: crystal structure of thermus thermophilus hb82 argininosuccinate synthetase in complex with atp 56 d1h0ha2 not modelled 7.5 23 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3 57 d1x2na1 not modelled 7.5 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 58 c1w07A_ not modelled 7.4 31 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: arabidopsis thaliana acyl-coa oxidase 1 59 d1k47a1 not modelled 7.4 25 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:GHMP Kinase, N-terminal domain 60 d2i7na2 not modelled 7.1 31 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Fumble-like 61 c3a24A_ not modelled 7.1 8 PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of bt1871 retaining glycosidase 62 d2raqa1 not modelled 7.1 11 Fold:Ferredoxin-like Superfamily:MTH889-like Family:MTH889-like 63 c2iifA_ not modelled 7.1 14 PDB header:recombination/dna Chain: A: PDB Molecule:integration host factor; PDBTitle: single chain integration host factor mutant protein (scihf2-2 k45ae) in complex with dna 64 c2x3dC_ not modelled 7.0 16 PDB header:unknown function Chain: C: PDB Molecule:sso6206; PDBTitle: crystal structure of sso6206 from sulfolobus solfataricus p2 65 d1fh9a_ not modelled 6.9 10 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 66 c3iz5w_ not modelled 6.9 40 PDB header:ribosome Chain: W: PDB Molecule:60s ribosomal protein l22 (l22e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 67 c3l0zC_ not modelled 6.7 13 PDB header:transferase Chain: C: PDB Molecule:putative nicotinate-nucleotide-dimethylbenzimidazole PDBTitle: crystal structure of a putative nicotinate-nucleotide-2 dimethylbenzimidazole phosphoribosyltransferase from3 methanocaldococcus jannaschii dsm 2661 68 c3noyA_ not modelled 6.6 42 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe) 69 c2gefA_ not modelled 6.4 50 PDB header:hydrolase Chain: A: PDB Molecule:protease vp4; PDBTitle: crystal structure of a novel viral protease with a2 serine/lysine catalytic dyad mechanism 70 d2r5yb1 not modelled 6.4 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 71 c1p5jA_ not modelled 6.3 19 PDB header:lyase Chain: A: PDB Molecule:l-serine dehydratase; PDBTitle: crystal structure analysis of human serine dehydratase 72 d1p5ja_ not modelled 6.3 19 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 73 c2jyaA_ not modelled 6.3 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1810; PDBTitle: nmr solution structure of protein atu1810 from agrobacterium2 tumefaciens. northeast structural genomics consortium target atr23,3 ontario centre for structural proteomics target atc1776 74 d1j6ua3 not modelled 6.3 33 Fold:Ribokinase-like Superfamily:MurD-like peptide ligases, catalytic domain Family:MurCDEF 75 d1r85a_ not modelled 6.2 23 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 76 d1w85i_ not modelled 6.2 22 Fold:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Superfamily:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Family:Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 77 d1yrnb_ not modelled 6.2 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 78 c2jugB_ not modelled 6.2 33 PDB header:biosynthetic protein Chain: B: PDB Molecule:tubc protein; PDBTitle: multienzyme docking in hybrid megasynthetases 79 c3sz8D_ not modelled 6.2 10 PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei 80 c2wscL_ not modelled 6.2 24 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem i reaction center subunit xi, PDBTitle: improved model of plant photosystem i 81 d1exta3 not modelled 6.2 40 Fold:TNF receptor-like Superfamily:TNF receptor-like Family:TNF receptor-like 82 c2i7pA_ not modelled 6.1 31 PDB header:transferase Chain: A: PDB Molecule:pantothenate kinase 3; PDBTitle: crystal structure of human pank3 in complex with accoa 83 c2f5xC_ not modelled 6.1 20 PDB header:transport protein Chain: C: PDB Molecule:bugd; PDBTitle: structure of periplasmic binding protein bugd 84 c2y8sE_ not modelled 6.1 63 PDB header:membrane protein Chain: E: PDB Molecule:rhoptry neck protein 2; PDBTitle: co-structure of an ama1 mutant (y230a) with a surface2 exposed region of ron2 from toxoplasma gondii 85 c2cooA_ not modelled 6.0 11 PDB header:transferase Chain: A: PDB Molecule:lipoamide acyltransferase component of branched- PDBTitle: solution structure of the e3_binding domain of2 dihydrolipoamide branched chaintransacylase 86 c2iirJ_ not modelled 6.0 12 PDB header:transferase Chain: J: PDB Molecule:acetate kinase; PDBTitle: acetate kinase from a hypothermophile thermotoga maritima 87 d1lxna_ not modelled 5.9 24 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 88 c3no9C_ not modelled 5.9 14 PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase class ii; PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis 89 c2lk2A_ not modelled 5.9 17 PDB header:transcription Chain: A: PDB Molecule:homeobox protein tgif1; PDBTitle: solution nmr structure of homeobox domain (171-248) of human homeobox2 protein tgif1, northeast structural genomics consortium target3 hr4411b 90 d1huua_ not modelled 5.8 16 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 91 c2w1oA_ not modelled 5.8 25 PDB header:translation Chain: A: PDB Molecule:60s acidic ribosomal protein p2; PDBTitle: nmr structure of dimerization domain of human ribosomal2 protein p2 92 c3ugsB_ not modelled 5.7 18 PDB header:transferase Chain: B: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of a probable undecaprenyl diphosphate synthase2 (upps) from campylobacter jejuni 93 d2sici_ not modelled 5.7 63 Fold:Subtilisin inhibitor Superfamily:Subtilisin inhibitor Family:Subtilisin inhibitor 94 d1pwha_ not modelled 5.6 20 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 95 d2nrha1 not modelled 5.6 15 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:CoaX-like 96 d1pvla_ not modelled 5.6 18 Fold:Leukocidin-like Superfamily:Leukocidin-like Family:Leukocidin (pore-forming toxin) 97 d2gkea2 not modelled 5.5 23 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Diaminopimelate epimerase 98 c1p4eB_ not modelled 5.5 33 PDB header:dna binding protein/recombination/dna Chain: B: PDB Molecule:recombinase flp protein; PDBTitle: flpe w330f mutant-dna holliday junction complex 99 c3beyC_ not modelled 5.5 20 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:conserved protein o27018; PDBTitle: crystal structure of the protein o27018 from methanobacterium2 thermoautotrophicum. northeast structural genomics consortium target3 tt217