PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d2i7pa1

Fold library id	Fold	Superfamily	Family
d2i7pa1	Ribonuclease H-like motif	Actin-like ATPase domain	Fumble-like

Links to external resources
Added to library: Tue Mar 16 13:18:55 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q A E C Y Y F A N A S E P E R C Q K M P F N L D D P Y P L L V V N I G S G V S I L A V H S K D N Y K R V T G T S L G G G T F L G L C S L L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T
T T T
S
S S S S T T S
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G C E S F E E A L E M A S K G D S T Q A D K L V R D I Y G G D Y E R F G L P G W A V A S S F G N M I Y K E K R E S V S K E D L A R A T L V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G T S S S
B G G G T B
T T S T T G G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I T N N I G S V A R M C A V N E K I N R V V F V G N F L R V N T L S M K L L A Y A L D Y W S K G Q L K A L F L E H E G Y F G A V G A L L G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S G G G S S
T T T S
T T G G G T

. .

Sequence P N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	A	E	C	Y	Y	F	A	N	A	S	E	P	E	R	C	Q	K	M	P	F	N	L	D	D	P	Y	P	L	L	V	V	N	I	G	S	G	V	S	I	L	A	V	H	S	K	D	N	Y	K	R	V	T	G	T	S	L	G	G	G	T	F	L	G	L	C	S	L	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S						T	T	T		T	T	T										S			S							S	S	S									T	T									S		S												T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	C	E	S	F	E	E	A	L	E	M	A	S	K	G	D	S	T	Q	A	D	K	L	V	R	D	I	Y	G	G	D	Y	E	R	F	G	L	P	G	W	A	V	A	S	S	F	G	N	M	I	Y	K	E	K	R	E	S	V	S	K	E	D	L	A	R	A	T	L	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S													G	G	G	T	S								S	S		B	G	G	G	T	B		T	T	S				T	T	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	T	N	N	I	G	S	V	A	R	M	C	A	V	N	E	K	I	N	R	V	V	F	V	G	N	F	L	R	V	N	T	L	S	M	K	L	L	A	Y	A	L	D	Y	W	S	K	G	Q	L	K	A	L	F	L	E	H	E	G	Y	F	G	A	V	G	A	L	L	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T								S	G	G	G	S	S																T	T	T	S							T	T	G	G	G									T
	.	.
Sequence	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)