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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1n93X_

Fold library idPDB HeaderMoleculeTitle
c1n93X_PDB header: viral proteinChain: X: PDB Molecule: p40 nucleoprotein;PDBTitle: crystal structure of the borna disease virus nucleoprotein


Added to library: Tue Mar 16 13:05:47 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLPGKFLQYTVGGSDPHPGIGHEKDIRQNAVALLDQSRRDMFHTVTPSLVFLCLLIPGLHAAFVHGGVPR
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S










GGGTTSTTB
TTSTTTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ESYLSTPVTRGEQTVVKTAKFYGEKTTQRDLTELEISSIFSHCCSLLIGVVIGSSSKIKAGAEQIKKRFK
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Known secondary structure (DSSP)

TTSS
S

S
SS






T
SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence TMMAALNRPSHGETATLLQMFNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKEFMDQIKLVASYAQMTT
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Known secondary structure (DSSP) TT
TT

TTTT

TTSTT



TTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YTTIKEYLAECMDATLTIPVVAYEIRDFLEVSAKLKEDHADLFPFLGAIRHPDAIKLAPRSFPNLASAAF
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Known secondary structure (DSSP)

BGGGGSGGGGGGTTTTT
GGGGGGSGGGS
 .........290.........300.........310.........320.........330.....
Sequence YWSKKENSTIQPGASVKETQLARYRRREISRGEDGAELSGEISAIMKMIGVTGLN
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Known secondary structure (DSSP)




TT



TSB






SS

TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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