Email l.a.kelley@imperial.ac.uk Description P0AFD6 Date Thu Jan 5 11:25:59 GMT 2012 Unique Job ID 326cc93960c73e57

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2fug91 100.0 46 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 2 c2fugG_ 100.0 46 PDB header:oxidoreductase Chain: G: PDB Molecule:nadh-quinone oxidoreductase chain 9; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 3 d1xera_ 99.5 26 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Archaeal ferredoxins 4 d1jb0c_ 99.5 22 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 5 c2gmhA_ 99.5 22 PDB header:oxidoreductase Chain: A: PDB Molecule:electron transfer flavoprotein-ubiquinone PDBTitle: structure of porcine electron transfer flavoprotein-2 ubiquinone oxidoreductase in complexed with ubiquinone 6 d2fug34 99.5 12 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 7 d7fd1a_ 99.4 35 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 8 c1gthD_ 99.4 25 PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil 9 c2c3yA_ 99.4 32 PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase; PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus 10 c3gyxJ_ 99.4 25 PDB header:oxidoreductase Chain: J: PDB Molecule:adenylylsulfate reductase; PDBTitle: crystal structure of adenylylsulfate reductase from2 desulfovibrio gigas 11 d2c42a5 99.4 30 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 12 d1hfel2 99.4 24 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 13 d1gtea5 99.4 21 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 14 d2gmha3 99.4 24 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:ETF-QO domain-like 15 c2zvsB_ 99.3 25 PDB header:electron transport Chain: B: PDB Molecule:uncharacterized ferredoxin-like protein yfhl; PDBTitle: crystal structure of the 2[4fe-4s] ferredoxin from escherichia coli 16 d1rgva_ 99.3 28 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 17 d1h98a_ 99.3 31 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 18 d1blua_ 99.3 32 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 19 d1bc6a_ 99.3 38 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 20 c2fgoA_ 99.3 28 PDB header:electron transport Chain: A: PDB Molecule:ferredoxin; PDBTitle: structure of the 2[4fe-4s] ferredoxin from pseudomonas2 aeruginosa 21 d2fdna_ not modelled 99.3 37 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 22 c1hfeL_ not modelled 99.3 24 PDB header:hydrogenase Chain: L: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1) PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans 23 c1kqfB_ not modelled 99.3 34 PDB header:oxidoreductase Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur PDBTitle: formate dehydrogenase n from e. coli 24 d1jnrb_ not modelled 99.3 25 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 25 d1fcaa_ not modelled 99.3 37 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 26 d1h0hb_ not modelled 99.3 21 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 27 c2vpyB_ not modelled 99.2 23 PDB header:oxidoreductase Chain: B: PDB Molecule:nrfc protein; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp) 28 d1dura_ not modelled 99.2 37 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 29 d3c8ya3 not modelled 99.2 20 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 30 d1kqfb1 not modelled 99.2 32 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 31 d1clfa_ not modelled 99.2 40 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 32 c1gx7A_ not modelled 99.2 30 PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase 33 c1ti2F_ not modelled 99.2 19 PDB header:oxidoreductase Chain: F: PDB Molecule:pyrogallol hydroxytransferase small subunit; PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici 34 c1c4cA_ not modelled 99.2 18 PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum 35 d1y5ib1 not modelled 99.1 26 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 36 c2ivfB_ not modelled 99.1 36 PDB header:oxidoreductase Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum 37 c2v2kB_ not modelled 99.1 39 PDB header:electron transport Chain: B: PDB Molecule:ferredoxin; PDBTitle: the crystal structure of fdxa, a 7fe ferredoxin from2 mycobacterium smegmatis 38 d1vlfn2 not modelled 99.1 18 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 39 c2v4jE_ not modelled 99.0 28 PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration 40 c3c7bE_ not modelled 99.0 20 PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit beta; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus 41 d1iqza_ not modelled 99.0 18 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 42 c2fugC_ not modelled 99.0 12 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 43 d1vjwa_ not modelled 99.0 19 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 44 d3c7bb1 not modelled 98.9 23 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 45 d1sj1a_ not modelled 98.8 19 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 46 c3c7bA_ not modelled 98.8 23 PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit alpha; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus 47 c1dwlA_ not modelled 98.7 24 PDB header:electron transfer Chain: A: PDB Molecule:ferredoxin i; PDBTitle: the ferredoxin-cytochrome complex using heteronuclear nmr2 and docking simulation 48 d1fxra_ not modelled 98.7 14 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 49 c2v4jA_ not modelled 98.7 16 PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration 50 c3bk7A_ not modelled 98.3 29 PDB header:hydrolyase/translation Chain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii 51 d1nekb1 not modelled 98.1 22 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 52 d2bs2b1 not modelled 98.1 15 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 53 d1kf6b1 not modelled 98.0 24 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 54 c1nekB_ not modelled 97.9 22 PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound 55 c2h89B_ not modelled 97.9 24 PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound 56 d2v4jb1 not modelled 97.9 31 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 57 c2b76N_ not modelled 97.9 25 PDB header:oxidoreductase Chain: N: PDB Molecule:fumarate reductase iron-sulfur protein; PDBTitle: e. coli quinol fumarate reductase frda e49q mutation 58 c2bs2E_ not modelled 97.7 22 PDB header:oxidoreductase Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b; PDBTitle: quinol:fumarate reductase from wolinella succinogenes 59 c3cf4A_ not modelled 97.6 28 PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex 60 d2v4ja1 not modelled 95.5 21 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 61 d3c7ba1 not modelled 95.4 26 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 62 c2vdcI_ not modelled 93.6 24 PDB header:oxidoreductase Chain: I: PDB Molecule:glutamate synthase [nadph] small chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. 63 c1g8jC_ not modelled 63.8 13 PDB header:oxidoreductase Chain: C: PDB Molecule:arsenite oxidase; PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis 64 d1gtea1 not modelled 57.4 23 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Dihydropyrimidine dehydrogenase, N-terminal domain 65 d1fxda_ not modelled 57.3 25 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 66 c3mk7B_ not modelled 41.9 21 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit o; PDBTitle: the structure of cbb3 cytochrome oxidase 67 c2pmzS_ not modelled 34.2 21 PDB header:translation, transferase Chain: S: PDB Molecule:dna-directed rna polymerase subunit d; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 68 d1ogyb_ not modelled 34.1 26 Fold:Multiheme cytochromes Superfamily:Multiheme cytochromes Family:Di-heme elbow motif 69 c1igrA_ not modelled 19.8 45 PDB header:hormone receptor Chain: A: PDB Molecule:insulin-like growth factor receptor 1; PDBTitle: type 1 insulin-like growth factor receptor (domains 1-3) 70 c3o5aB_ not modelled 17.9 24 PDB header:oxidoreductase Chain: B: PDB Molecule:diheme cytochrome c napb; PDBTitle: crystal structure of partially reduced periplasmic nitrate reductase2 from cupriavidus necator using ionic liquids 71 d1djqa3 not modelled 16.6 33 Fold:Nucleotide-binding domain Superfamily:Nucleotide-binding domain Family:N-terminal domain of adrenodoxin reductase-like 72 c2fugA_ not modelled 13.8 21 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-quinone oxidoreductase chain 1; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 73 d1z1sa1 not modelled 11.7 23 Fold:Cystatin-like Superfamily:NTF2-like Family:PhzA/PhzB-like 74 c1fqjC_ not modelled 11.6 28 PDB header:signaling protein Chain: C: PDB Molecule:retinal rod rhodopsin-sensitive cgmp 3',5'- PDBTitle: crystal structure of the heterotrimeric complex of the rgs2 domain of rgs9, the gamma subunit of phosphodiesterase and3 the gt/i1 chimera alpha subunit [(rgs9)-(pdegamma)-4 (gt/i1alpha)-(gdp)-(alf4-)-(mg2+)] 75 c2kn0A_ not modelled 10.5 17 PDB header:apoptosis Chain: A: PDB Molecule:fn14; PDBTitle: solution nmr structure of xenopus fn14 76 d2dmda2 not modelled 10.3 40 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 77 c2eoyA_ not modelled 10.2 45 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the c2h2 type zinc finger (region 557-2 589) of human zinc finger protein 473 78 c3k30B_ not modelled 9.7 40 PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex 79 c2bpbB_ not modelled 9.4 30 PDB header:oxidoreductase Chain: B: PDB Molecule:sulfite\:cytochrome c oxidoreductase subunit b; PDBTitle: sulfite dehydrogenase from starkeya novella 80 c1moxB_ not modelled 9.2 24 PDB header:transferase/growth factor Chain: B: PDB Molecule:epidermal growth factor receptor; PDBTitle: crystal structure of human epidermal growth factor receptor (residues2 1-501) in complex with tgf-alpha 81 d1m5ha1 not modelled 8.8 46 Fold:Ferredoxin-like Superfamily:Formylmethanofuran:tetrahydromethanopterin formyltransferase Family:Formylmethanofuran:tetrahydromethanopterin formyltransferase 82 c2l5rA_ not modelled 8.8 44 PDB header:antimicrobial protein Chain: A: PDB Molecule:antimicrobial peptide alyteserin-1c; PDBTitle: conformational and membrane interactins studies of antimicrobial2 peptide alyteserin-1c 83 d3c7bb3 not modelled 8.7 14 Fold:Nitrite and sulphite reductase 4Fe-4S domain-like Superfamily:Nitrite and sulphite reductase 4Fe-4S domain-like Family:Nitrite and sulphite reductase 4Fe-4S domain-like 84 d1mr1c_ not modelled 7.7 23 Fold:SAND domain-like Superfamily:SAND domain-like Family:SMAD4-binding domain of oncoprotein Ski 85 c1djnB_ not modelled 7.4 50 PDB header:oxidoreductase Chain: B: PDB Molecule:trimethylamine dehydrogenase; PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1) 86 d1ftra1 not modelled 7.3 31 Fold:Ferredoxin-like Superfamily:Formylmethanofuran:tetrahydromethanopterin formyltransferase Family:Formylmethanofuran:tetrahydromethanopterin formyltransferase 87 c2eqpA_ not modelled 7.1 19 PDB header:transcription Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily PDBTitle: solution structure of the stn_tnfrsf12a_tnfr domain of2 tumor necrosis factor receptor superfamily member 12a3 precursor 88 d1m5sa1 not modelled 7.0 46 Fold:Ferredoxin-like Superfamily:Formylmethanofuran:tetrahydromethanopterin formyltransferase Family:Formylmethanofuran:tetrahydromethanopterin formyltransferase 89 c2axkA_ not modelled 5.9 25 PDB header:toxin Chain: A: PDB Molecule:discrepin; PDBTitle: solution structure of discrepin, a scorpion venom toxin2 blocking k+ channels. 90 d1g8ka2 not modelled 5.8 33 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3