PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3mk7B_

Fold library id	PDB Header	Molecule	Title
c3mk7B_	PDB header: oxidoreductase	Chain: B: PDB Molecule: cytochrome c oxidase, cbb3-type, subunit o;	PDBTitle: the structure of cbb3 cytochrome oxidase

Links to external resources
Added to library: Sun Aug 29 03:22:41 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K L E K N V G L L T L F M I L A V S I G G L T Q I V P L F F Q D S V N E P V E G M K P Y T A L Q L E G R D L Y I R E G C V G C H S Q M I R P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T
S T T T S
T T
T G G G T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F R A E T E R Y G H Y S V A G E S V Y D H P F L W G S K R T G P D L A R V G G R Y S D D W H R A H L Y N P R N V V P E S K M P S Y P W L V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
G G G G T T
S S
S
S S
T T
T T T S
S T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . .

Sequence N T L D G K D T A K K M S A L R M L G V P Y T E E D I A G A R D S V N G K T E M D A M V A Y L Q V L G T A L T N K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T T T
T T S T T
B T T T T T T G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	L	E	K	N	V	G	L	L	T	L	F	M	I	L	A	V	S	I	G	G	L	T	Q	I	V	P	L	F	F	Q	D	S	V	N	E	P	V	E	G	M	K	P	Y	T	A	L	Q	L	E	G	R	D	L	Y	I	R	E	G	C	V	G	C	H	S	Q	M	I	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S													T	T							T							S	T	T	T	S			T	T																			T	G	G	G	T							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	R	A	E	T	E	R	Y	G	H	Y	S	V	A	G	E	S	V	Y	D	H	P	F	L	W	G	S	K	R	T	G	P	D	L	A	R	V	G	G	R	Y	S	D	D	W	H	R	A	H	L	Y	N	P	R	N	V	V	P	E	S	K	M	P	S	Y	P	W	L	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								S	S				G	G	G	G	T	T		S	S					S			S	S				T	T		T	T	T	S																S	T	T							T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Sequence	N	T	L	D	G	K	D	T	A	K	K	M	S	A	L	R	M	L	G	V	P	Y	T	E	E	D	I	A	G	A	R	D	S	V	N	G	K	T	E	M	D	A	M	V	A	Y	L	Q	V	L	G	T	A	L	T	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B				T	T											T	T									T	T	S					T	T		B										T	T	T	T	T	T	G	G	G