Fold library entry viewer: c3k30B_

Added to library: Sat Aug 28 21:27:04 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	A	A	P	Y	D	V	L	F	E	P	V	Q	I	G	P	F	T	T	K	N	R	F	Y	Q	V	P	H	C	N	G	M	G	Y	R	D	P	S	A	Q	A	S	M	R	K	I	K	A	E	G	G	W	S	A	V	C	T	E	Q	V	E	I	H	A	T	S	D	I	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	G	G	G	G	G						T	T				S	S	S									S		S	S	S															T	T		S										S	G	G	G			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	I	E	L	R	I	W	D	D	Q	D	L	P	A	L	K	R	I	A	D	A	I	H	E	G	G	G	L	A	G	I	E	L	A	H	N	G	M	N	A	P	N	Q	L	S	R	E	T	P	L	G	P	G	H	L	P	V	A	P	D	T	I	A	P	I	Q	A	R	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S	S	G	G	G															T											G	G	G				T	T	T							S	S	S					S	S				S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	K	Q	D	I	D	D	L	R	R	W	H	R	N	A	V	R	R	S	I	E	A	G	Y	D	I	V	Y	V	Y	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T		S								T	T		S								T	T	T					S	T	T	S	S	S					T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	L	D	E	C	A	G	R	A	A	V	A	C	R	I	T	V	E	E	E	I	D	G	G	I	T	R	E	D	I	E	G	V	L	R	E	L	G	E	L	P	D	L	W	D	F	A	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	Q	E	E	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S								S				S	T	T	S														T	T	S	S	S							S	S					S			T	T	T			T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	G	L	K	K	L	T	T	K	P	V	V	G	V	G	R	F	T	S	P	D	A	M	V	R	Q	I	K	A	G	I	L	D	L	I	G	A	A	R	P	S	I	A	D	P	F	L	P	N	K	I	R	D	G	R	L	N	L	I	R	E	C	I	G	C	N	I	C	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	G	G	G		S	S						S														T	T	S		S					S							T	T								T		G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	D	L	T	M	S	P	I	R	C	T	Q	N	P	S	M	G	E	E	W	R	R	G	W	H	P	E	R	I	R	A	K	E	S	D	A	R	V	L	V	V	G	A	G	P	S	G	L	E	A	A	R	A	L	G	V	R	G	Y	D	V	V	L	A	E	A	G	R	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S					S	S		T	T	T	T	T								S	S						S	S										S														T								S	S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	G	R	V	T	Q	E	S	A	L	P	G	L	S	A	W	G	R	V	K	E	Y	R	E	A	V	L	A	E	L	P	N	V	E	I	Y	R	E	S	P	M	T	G	D	D	I	V	E	F	G	F	E	H	V	I	T	A	T	G	A	T	W	R	T	D	G	V	A	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T							T	S	T	T		G	G	G	G												T		T	T					S	S											T	T														S	S			S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	T	T	A	L	P	I	A	E	G	M	Q	V	L	G	P	D	D	L	F	A	G	R	L	P	D	G	K	K	V	V	V	Y	D	D	D	H	Y	Y	L	G	G	V	V	A	E	L	L	A	Q	K	G	Y	E	V	S	I	V	T	P	G	A	Q	V	S	S	W	T	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S				B		T	T	S											T				S	S	S								S		S	S												T	T								S	S	S	S	T	T	G	G	G	G	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	F	E	V	N	R	I	Q	R	R	L	I	E	N	G	V	A	R	V	T	D	H	A	V	V	A	V	G	A	G	G	V	T	V	R	D	T	Y	A	S	I	E	R	E	L	E	C	D	A	V	V	M	V	T	A	R	L	P	R	E	E	L	Y	L	D	L	V	A	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T												T	T						S								T	T							T	T	T									S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Sequence	D	A	G	E	I	A	S	V	R	G	I	G	D	A	W	A	P	G	T	I	A	A	A	V	W	S	G	R	R	A	A	E	E	F	D	A	V	L	P	S	N	D	E	V	P	F	R	R	E	V	T	Q	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S		S						G	G	G	T	S																		T	T						T	T	S		S	S

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PDB structure

FASTA sequence

Hidden Markov model

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