Email l.a.kelley@imperial.ac.uk Description P10100 Date Thu Jan 5 11:32:01 GMT 2012 Unique Job ID 146d326858d897b4

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1x60A_ 99.6 26 PDB header:hydrolase Chain: A: PDB Molecule:sporulation-specific n-acetylmuramoyl-l-alanine PDBTitle: solution structure of the peptidoglycan binding domain of2 b. subtilis cell wall lytic enzyme cwlc 2 d1utaa_ 99.5 24 Fold:Ferredoxin-like Superfamily:Sporulation related repeat Family:Sporulation related repeat 3 c3d30A_ 98.8 19 PDB header:peptidoglycan-binding protein Chain: A: PDB Molecule:expansin like protein; PDBTitle: structure of an expansin like protein from bacillus subtilis at 1.9a2 resolution 4 d1n10a2 97.7 15 Fold:Double psi beta-barrel Superfamily:Barwin-like endoglucanases Family:Pollen allergen PHL P 1 N-terminal domain 5 c1n10A_ 97.2 15 PDB header:allergen Chain: A: PDB Molecule:pollen allergen phl p 1; PDBTitle: crystal structure of phl p 1, a major timothy grass pollen allergen 6 c2hczX_ 96.2 15 PDB header:allergen Chain: X: PDB Molecule:beta-expansin 1a; PDBTitle: crystal structure of expb1 (zea m 1), a beta-expansin and group-12 pollen allergen from maize 7 d1bw3a_ 86.3 22 Fold:Double psi beta-barrel Superfamily:Barwin-like endoglucanases Family:Barwin 8 d1wc2a1 85.9 11 Fold:Double psi beta-barrel Superfamily:Barwin-like endoglucanases Family:Eng V-like 9 d1grja2 74.5 17 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 10 c3bmbB_ 73.0 14 PDB header:rna binding protein Chain: B: PDB Molecule:regulator of nucleoside diphosphate kinase; PDBTitle: crystal structure of a new rna polymerase interacting2 protein 11 d1w2za3 70.7 20 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 12 c1grjA_ 60.1 16 PDB header:transcription regulation Chain: A: PDB Molecule:grea protein; PDBTitle: grea transcript cleavage factor from escherichia coli 13 d1vqoq1 45.0 20 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal proteins L24p and L21e 14 d2f23a2 38.9 11 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 15 c3fuyC_ 37.8 33 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:putative integron gene cassette protein; PDBTitle: structure from the mobile metagenome of cole harbour salt2 marsh: integron cassette protein hfx_cass1 16 d2c0ra1 37.8 9 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 17 c2pn0D_ 37.4 7 PDB header:transcription Chain: D: PDB Molecule:prokaryotic transcription elongation factor PDBTitle: prokaryotic transcription elongation factor grea/greb from2 nitrosomonas europaea 18 c3caiA_ 37.2 20 PDB header:transferase Chain: A: PDB Molecule:possible aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis rv3778c2 protein 19 d1bs0a_ 36.7 24 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 20 d1w6ga3 35.1 15 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 21 d1m32a_ not modelled 33.8 14 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 22 c2p4vA_ not modelled 32.3 18 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 23 d2etna2 not modelled 31.2 13 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 24 c3efyB_ not modelled 26.4 25 PDB header:cell cycle Chain: B: PDB Molecule:cif (cell cycle inhibiting factor); PDBTitle: structure of the cyclomodulin cif from pathogenic2 escherichia coli 25 c2yrrA_ not modelled 24.7 19 PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class v; PDBTitle: hypothetical alanine aminotransferase (tth0173) from thermus2 thermophilus hb8 26 d1v72a1 not modelled 24.6 9 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 27 c3gqjA_ not modelled 22.4 25 PDB header:unknown function Chain: A: PDB Molecule:cell inhibiting factor (cif); PDBTitle: crystal structure of cell inhibiting factor (cif) from photorhabdus2 luminescens 28 c3m3gA_ not modelled 22.3 20 PDB header:polysaccharide-binding protein Chain: A: PDB Molecule:epl1 protein; PDBTitle: crystal structure of sm1, an elicitor of plant defence responses from2 trichoderma virens. 29 c2etnA_ not modelled 22.2 13 PDB header:transcription Chain: A: PDB Molecule:anti-cleavage anti-grea transcription factor PDBTitle: crystal structure of thermus aquaticus gfh1 30 c3eitB_ not modelled 21.9 32 PDB header:unknown function Chain: B: PDB Molecule:putative atp/gtp binding protein; PDBTitle: the 2.6 angstrom crystal structure of chbp, the cif homologue from2 burkholderia pseudomallei 31 d1qz9a_ not modelled 21.7 17 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 32 c2fyfB_ not modelled 20.9 15 PDB header:transferase Chain: B: PDB Molecule:phosphoserine aminotransferase; PDBTitle: structure of a putative phosphoserine aminotransferase from2 mycobacterium tuberculosis 33 d1m6sa_ not modelled 20.7 11 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 34 d2jioa1 not modelled 20.6 11 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 35 d1t3ia_ not modelled 20.6 20 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 36 d2f8ja1 not modelled 20.0 18 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 37 d1g8ka1 not modelled 19.8 11 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 38 c2huuA_ not modelled 19.5 24 PDB header:transferase Chain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine 39 d1ogya1 not modelled 18.9 15 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 40 c3iz6Y_ not modelled 18.2 23 PDB header:ribosome Chain: Y: PDB Molecule:40s ribosomal protein s28 (s28e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 41 d1vq3a_ not modelled 18.0 15 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 42 c3hqtB_ not modelled 17.7 9 PDB header:transferase Chain: B: PDB Molecule:cai-1 autoinducer synthase; PDBTitle: plp-dependent acyl-coa transferase cqsa 43 c3f9tB_ not modelled 16.8 13 PDB header:lyase Chain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution 44 d1j5ya2 not modelled 16.6 11 Fold:HPr-like Superfamily:Putative transcriptional regulator TM1602, C-terminal domain Family:Putative transcriptional regulator TM1602, C-terminal domain 45 c2yx5A_ not modelled 16.1 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0062 protein mj1593; PDBTitle: crystal structure of methanocaldococcus jannaschii purs, one of the2 subunits of formylglycinamide ribonucleotide amidotransferase in the3 purine biosynthetic pathway 46 c2zw2B_ not modelled 15.3 18 PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein sts178; PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs) 47 c3hyjD_ not modelled 15.1 4 PDB header:transcription regulator Chain: D: PDB Molecule:protein duf199/whia; PDBTitle: crystal structure of the n-terminal laglidadg domain of duf199/whia 48 c3eh7A_ not modelled 14.8 22 PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coa-transferase; PDBTitle: the structure of a putative 4-hydroxybutyrate coa-transferase from2 porphyromonas gingivalis w83 49 d1bjna_ not modelled 13.5 8 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 50 d1iuga_ not modelled 13.0 16 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 51 d1eg5a_ not modelled 12.5 12 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 52 c2eefA_ not modelled 12.2 24 PDB header:sugar binding protein Chain: A: PDB Molecule:protein phosphatase 1, regulatory (inhibitor) PDBTitle: solution structure of the cbm_21 domain from human protein2 phosphatase 1, regulatory (inhibitor) subunit 3b 53 d1elua_ not modelled 12.1 17 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 54 c3seeA_ not modelled 11.9 13 PDB header:sugar binding protein Chain: A: PDB Molecule:hypothetical sugar binding protein; PDBTitle: crystal structure of a hypothetical sugar binding protein (bt_4411)2 from bacteroides thetaiotaomicron vpi-5482 at 1.25 a resolution 55 d1oj4a2 not modelled 11.4 14 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE 56 c3f0hA_ not modelled 11.4 12 PDB header:transferase Chain: A: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (rer070207000802) from2 eubacterium rectale at 1.70 a resolution 57 d1h0ca_ not modelled 11.3 20 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 58 c3qm2A_ not modelled 11.2 5 PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium 59 c2yujA_ not modelled 11.2 14 PDB header:protein binding Chain: A: PDB Molecule:ubiquitin fusion degradation 1-like; PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1 60 c3mazA_ not modelled 11.0 33 PDB header:signaling protein Chain: A: PDB Molecule:signal-transducing adaptor protein 1; PDBTitle: crystal structure of the human brdg1/stap-1 sh2 domain in complex with2 the ntal ptyr136 peptide 61 d1uh6a_ not modelled 11.0 60 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 62 d1uasa1 not modelled 10.9 23 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 63 c3p04B_ not modelled 10.8 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 64 d1y0ya2 not modelled 10.4 16 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases 65 c2l9vA_ not modelled 10.3 22 PDB header:rna binding protein Chain: A: PDB Molecule:pre-mrna-processing factor 40 homolog a; PDBTitle: nmr structure of the ff domain l24a mutant's folding transition state 66 d1sddb2 not modelled 10.0 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 67 c3iz5U_ not modelled 9.9 33 PDB header:ribosome Chain: U: PDB Molecule:60s ribosomal protein l21 (l21e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 68 d1vpra1 not modelled 9.9 50 Fold:Lipocalins Superfamily:Lipocalins Family:Dinoflagellate luciferase repeat 69 c2hzpA_ not modelled 9.8 17 PDB header:hydrolase Chain: A: PDB Molecule:kynureninase; PDBTitle: crystal structure of homo sapiens kynureninase 70 d2gova1 not modelled 9.6 20 Fold:Probable bacterial effector-binding domain Superfamily:Probable bacterial effector-binding domain Family:SOUL heme-binding protein 71 c3p04A_ not modelled 9.6 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 72 c3bpqD_ not modelled 9.4 23 PDB header:toxin Chain: D: PDB Molecule:toxin rele3; PDBTitle: crystal structure of relb-rele antitoxin-toxin complex from2 methanococcus jannaschii 73 c3e77A_ not modelled 9.4 10 PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp 74 c2ivwA_ not modelled 9.4 24 PDB header:lipoprotein Chain: A: PDB Molecule:pilp pilot protein; PDBTitle: the solution structure of a domain from the neisseria2 meningitidis pilp pilot protein. 75 d1vjoa_ not modelled 9.3 20 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 76 d2iv2x1 not modelled 8.9 14 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 77 d2exda1 not modelled 8.8 12 Fold:OB-fold Superfamily:NfeD domain-like Family:NfeD domain-like 78 c2dr1A_ not modelled 8.8 8 PDB header:transferase Chain: A: PDB Molecule:386aa long hypothetical serine aminotransferase; PDBTitle: crystal structure of the ph1308 protein from pyrococcus horikoshii ot3 79 c3h14A_ not modelled 8.7 16 PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi 80 c3cq6E_ not modelled 8.7 21 PDB header:transferase Chain: E: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: histidinol-phosphate aminotransferase from corynebacterium2 glutamicum holo-form (plp covalently bound ) 81 c2w8wA_ not modelled 8.6 18 PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: n100y spt with plp-ser 82 c2xx7B_ not modelled 8.6 22 PDB header:transport protein Chain: B: PDB Molecule:glutamate receptor 2; PDBTitle: crystal structure of 1-(4-(1-pyrrolidinylcarbonyl)phenyl)-3-2 (trifluoromethyl)-4,5,6,7-tetrahydro-1h-indazole in complex with3 the ligand binding domain of the rat glua2 receptor and glutamate4 at 2.2a resolution. 83 c3ffrA_ not modelled 8.6 18 PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase serc; PDBTitle: crystal structure of a phosphoserine aminotransferase serc (chu_0995)2 from cytophaga hutchinsonii atcc 33406 at 1.75 a resolution 84 d1s50a1 not modelled 8.5 28 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 85 c3a2bA_ not modelled 8.4 7 PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: crystal structure of serine palmitoyltransferase from sphingobacterium2 multivorum with substrate l-serine 86 c4a1aP_ not modelled 8.4 27 PDB header:ribosome Chain: P: PDB Molecule:60s ribosomal protein l21; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3. 87 d1xjva2 not modelled 8.3 35 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 88 d1qpga_ not modelled 8.3 17 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 89 c3bdlA_ not modelled 8.1 11 PDB header:hydrolase Chain: A: PDB Molecule:staphylococcal nuclease domain-containing PDBTitle: crystal structure of a truncated human tudor-sn 90 c1zc1A_ not modelled 8.0 14 PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites 91 c1wwtA_ not modelled 7.9 25 PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase, cytoplasmic; PDBTitle: solution structure of the tgs domain from human threonyl-2 trna synthetase 92 c2ordA_ not modelled 7.8 8 PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution 93 c2el8A_ not modelled 7.8 24 PDB header:signaling protein Chain: A: PDB Molecule:signal-transducing adaptor protein 2; PDBTitle: solution structure of the human stap2 sh2 domain 94 d1gtda_ not modelled 7.8 11 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 95 c2v3tA_ not modelled 7.7 19 PDB header:receptor Chain: A: PDB Molecule:glutamate receptor delta-2 subunit synonym PDBTitle: structure of the ligand-binding core of the ionotropic2 glutamate receptor-like glurdelta2 in the apo form 96 c1d2fB_ not modelled 7.7 9 PDB header:transferase Chain: B: PDB Molecule:maly protein; PDBTitle: x-ray structure of maly from escherichia coli: a pyridoxal-5'-2 phosphate-dependent enzyme acting as a modulator in mal gene3 expression 97 d2h9fa1 not modelled 7.5 22 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PA0793-like 98 c3dxvA_ not modelled 7.5 15 PDB header:isomerase Chain: A: PDB Molecule:alpha-amino-epsilon-caprolactam racemase; PDBTitle: the crystal structure of alpha-amino-epsilon-caprolactam racemase from2 achromobacter obae 99 d2gkea2 not modelled 7.5 28 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Diaminopimelate epimerase