PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3gqjA_

Fold library id	PDB Header	Molecule	Title
c3gqjA_	PDB header: unknown function	Chain: A: PDB Molecule: cell inhibiting factor (cif);	PDBTitle: crystal structure of cell inhibiting factor (cif) from2 photorhabdus luminescens

Links to external resources
Added to library: Sun Aug 29 03:30:00 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S I N T I K L I D D I I A L H N D P K G N K L L W N D N W Q D K I I N R D L A N I F E K I D E S V S E L G G L E M Y Q E M V G V N P Y D P T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T
S S
G G G
T T S S S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E P V C G L S A Q N I F K L M T E G E H A V D P V E M A Q T G K I D G N E F A E S V D Q L S S A K N Y V A L V N D R R L G H M F L I D I P S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S
T T
T T S T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N D Q E T V G Y I Y Q S D L G Q G A L P P L K I A D W L N S R G K D A V S L N K L K K L L S R E F N L L S D D E K R A L I S E T L D I H K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
B
S
S S S
B
T G G G
S G G G G G S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . .

Sequence V S N V E L D R I K R D R G V D I Y L T E Y D V N N F Y E N I E T L K S K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
G G G S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	I	N	T	I	K	L	I	D	D	I	I	A	L	H	N	D	P	K	G	N	K	L	L	W	N	D	N	W	Q	D	K	I	I	N	R	D	L	A	N	I	F	E	K	I	D	E	S	V	S	E	L	G	G	L	E	M	Y	Q	E	M	V	G	V	N	P	Y	D	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	T	T						T					S	S		G	G	G																	T	T	S									S	S		T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	P	V	C	G	L	S	A	Q	N	I	F	K	L	M	T	E	G	E	H	A	V	D	P	V	E	M	A	Q	T	G	K	I	D	G	N	E	F	A	E	S	V	D	Q	L	S	S	A	K	N	Y	V	A	L	V	N	D	R	R	L	G	H	M	F	L	I	D	I	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	S	S											S												T	T			T	T	S									T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	D	Q	E	T	V	G	Y	I	Y	Q	S	D	L	G	Q	G	A	L	P	P	L	K	I	A	D	W	L	N	S	R	G	K	D	A	V	S	L	N	K	L	K	K	L	L	S	R	E	F	N	L	L	S	D	D	E	K	R	A	L	I	S	E	T	L	D	I	H	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S										B		S		S	S	S			B								T	G	G	G													S	G	G	G	G	G	S															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Sequence	V	S	N	V	E	L	D	R	I	K	R	D	R	G	V	D	I	Y	L	T	E	Y	D	V	N	N	F	Y	E	N	I	E	T	L	K	S	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			G	G	G	S		T	T