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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3dxvA_

Fold library idPDB HeaderMoleculeTitle
c3dxvA_PDB header: isomeraseChain: A: PDB Molecule: alpha-amino-epsilon-caprolactam racemase;PDBTitle: the crystal structure of alpha-amino-epsilon-caprolactam2 racemase from achromobacter obae


Added to library: Tue Mar 16 14:36:21 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KALYDRDGAAIGNLQKLRFFPLAISGGRGARLIEENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANP
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Known secondary structure (DSSP)

S
GGG


SS


BTTTS
SSTTTTT
TT
BS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTV
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Known secondary structure (DSSP) S
S
SSSS

TTT
TTTSSS

TT



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GSMAFSGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKF
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Known secondary structure (DSSP) TT





SSS
BTTBTTSTS
TT

SSBSTTTSB


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGLPLSAVIAPAEILDCASAFAMQ
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Known secondary structure (DSSP) TT

TTT
TTTTSSSSGGGGTT


S
GGGGTTS

TS
SSSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence TLHGNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSR
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Known secondary structure (DSSP) TTTT
TT
TTTTTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence EPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDRAFSELSAVSNEEIAQFA
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Known secondary structure (DSSP)
T
STTS



TT

TGGGS
T

 ..
Sequence GW
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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