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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3seeA_

Fold library idPDB HeaderMoleculeTitle
c3seeA_PDB header: sugar binding proteinChain: A: PDB Molecule: hypothetical sugar binding protein;PDBTitle: crystal structure of a hypothetical sugar binding protein (bt_4411)2 from bacteroides thetaiotaomicron vpi-5482 at 1.25 a resolution


Added to library: Sat Aug 6 09:47:59 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QNLIKNEKFATEVTNKVTNPSKATAGEWFIXNNEADGVTTIAWEQTGDAKYPNAXKIDNSGAEKNTSWYK
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Known secondary structure (DSSP)



SSTT

S



SSGGGS
TTS
S
TTS

S
TTS

TT
SS


TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AFLGQRITDGLEKGIYVLTFYAKAKEAGTPVSVYIKQTNEEKNDNGKLNTTFFXRRDYDADAQPNASGAQ
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Known secondary structure (DSSP)
S


SSSSTT
SS

B
TTS
B


TT

TTT
TTSBSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YNFKIKDADKWTKVVVYYDXGQVVNAISSKKSNPALEVSDTDDDAAILKDCYVAILGQNKGGVVEISDVT
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Known secondary structure (DSSP)

STT

S
SSBTTT
TT



TT
S

STT
 ....
Sequence LKKK
Predicted secondary structure

SS confidence



Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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