Email l.a.kelley@imperial.ac.uk Description P76235 Date Thu Jan 5 12:21:00 GMT 2012 Unique Job ID 0d475dbb2e2cf157

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1rs0A_ 99.6 15 PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: crystal structure analysis of the bb segment of factor b2 complexed with di-isopropyl-phosphate (dip) 2 c2ok5A_ 99.5 17 PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: human complement factor b 3 d2ok5a1 99.5 15 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 4 c2i6sA_ 99.4 18 PDB header:hydrolase Chain: A: PDB Molecule:complement c2a fragment; PDBTitle: complement component c2a 5 c2x5nA_ 99.4 11 PDB header:nuclear protein Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn10; PDBTitle: crystal structure of the sprpn10 vwa domain 6 c2iueA_ 99.4 13 PDB header:membrane protein Chain: A: PDB Molecule:pactolus i-domain; PDBTitle: pactolus i-domain: functional switching of the rossmann2 fold 7 d1jeyb2 99.3 13 Fold:vWA-like Superfamily:vWA-like Family:Ku80 subunit N-terminal domain 8 d1ijba_ 99.2 11 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 9 c3ibsA_ 99.2 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein batb; PDBTitle: crystal structure of conserved hypothetical protein batb from2 bacteroides thetaiotaomicron 10 c2nvoA_ 99.1 16 PDB header:rna binding protein Chain: A: PDB Molecule:ro sixty-related protein, rsr; PDBTitle: crystal structure of deinococcus radiodurans ro (rsr) protein 11 d1jeya2 99.1 12 Fold:vWA-like Superfamily:vWA-like Family:Ku70 subunit N-terminal domain 12 d1yvra2 99.1 14 Fold:vWA-like Superfamily:vWA-like Family:RoRNP C-terminal domain-like 13 d1u0oc1 99.1 11 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 14 c2x31F_ 99.1 21 PDB header:ligase Chain: F: PDB Molecule:magnesium-chelatase 60 kda subunit; PDBTitle: modelling of the complex between subunits bchi and bchd of magnesium2 chelatase based on single-particle cryo-em reconstruction at 7.5 ang 15 d1shux_ 99.0 14 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 16 d1q0pa_ 99.0 16 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 17 c2xggB_ 99.0 16 PDB header:hydrolase Chain: B: PDB Molecule:microneme protein 2; PDBTitle: structure of toxoplasma gondii micronemal protein 2 a_i2 domain 18 c3n2nC_ 98.9 14 PDB header:toxin receptor Chain: C: PDB Molecule:anthrax toxin receptor 1; PDBTitle: the crystal structure of tumor endothelial marker 8 (tem8)2 extracellular domain 19 c1jeyB_ 98.9 13 PDB header:dna binding protein/dna Chain: B: PDB Molecule:ku80; PDBTitle: crystal structure of the ku heterodimer bound to dna 20 c2b2xB_ 98.9 12 PDB header:immune system Chain: B: PDB Molecule:integrin alpha-1; PDBTitle: vla1 rdeltah i-domain complexed with a quadruple mutant of the aqc22 fab 21 d1v7pc_ not modelled 98.9 11 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 22 d1atza_ not modelled 98.8 13 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 23 d1n3ya_ not modelled 98.8 15 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 24 c3gxbB_ not modelled 98.8 10 PDB header:cell adhesion Chain: B: PDB Molecule:von willebrand factor; PDBTitle: crystal structure of vwf a2 domain 25 d1pt6a_ not modelled 98.8 11 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 26 d1mjna_ not modelled 98.8 15 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 27 d1ck4a_ not modelled 98.7 11 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 28 d1mf7a_ not modelled 98.7 12 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 29 d1pd0a3 not modelled 98.6 13 Fold:vWA-like Superfamily:vWA-like Family:Trunk domain of Sec23/24 30 c3ragA_ not modelled 98.4 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein aaci_0196 from2 alicyclobacillus acidocaldarius subsp. acidocaldarius dsm 446 31 d1tyeb2 not modelled 98.3 16 Fold:vWA-like Superfamily:vWA-like Family:Integrin A (or I) domain 32 c1yvrA_ 98.2 15 PDB header:rna binding protein Chain: A: PDB Molecule:60-kda ss-a/ro ribonucleoprotein; PDBTitle: ro autoantigen 33 c3v4pB_ not modelled 98.0 15 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-7; PDBTitle: crystal structure of a4b7 headpiece complexed with fab act-1 34 c3fcuB_ not modelled 98.0 16 PDB header:cell adhesion/blood clotting Chain: B: PDB Molecule:integrin beta-3; PDBTitle: structure of headpiece of integrin aiibb3 in open conformation 35 c1jeqA_ not modelled 97.5 13 PDB header:dna binding protein Chain: A: PDB Molecule:ku70; PDBTitle: crystal structure of the ku heterodimer 36 c1u8cB_ not modelled 97.2 15 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: a novel adaptation of the integrin psi domain revealed from its2 crystal structure 37 c3k6sB_ not modelled 96.1 14 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-2; PDBTitle: structure of integrin alphaxbeta2 ectodomain 38 c1pd0A_ not modelled 96.0 13 PDB header:transport protein Chain: A: PDB Molecule:protein transport protein sec24; PDBTitle: crystal structure of the copii coat subunit, sec24,2 complexed with a peptide from the snare protein sed53 (yeast syntaxin-5) 39 c1m2vB_ not modelled 95.2 14 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24; PDBTitle: crystal structure of the yeast sec23/24 heterodimer 40 c3eg9B_ not modelled 89.8 14 PDB header:protein transport Chain: B: PDB Molecule:sec24 related gene family, member d; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin 41 c3egxB_ not modelled 89.1 13 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23a/24a complexed with the snare protein sec22b and3 bound to the transport signal sequence of the snare protein4 bet1 42 c3eg9A_ not modelled 84.2 15 PDB header:protein transport Chain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin 43 d2qtva3 not modelled 82.5 15 Fold:vWA-like Superfamily:vWA-like Family:Trunk domain of Sec23/24 44 c3eh2B_ not modelled 78.2 13 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24c; PDBTitle: crystal structure of the human copii-coat protein sec24c 45 c1m2oA_ not modelled 54.8 17 PDB header:protein transport/signaling protein Chain: A: PDB Molecule:protein transport protein sec23; PDBTitle: crystal structure of the sec23-sar1 complex 46 d1h7na_ not modelled 37.0 18 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) 47 c3atyA_ not modelled 33.5 11 PDB header:oxidoreductase Chain: A: PDB Molecule:prostaglandin f2a synthase; PDBTitle: crystal structure of tcoye 48 c2ftpA_ not modelled 31.8 16 PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa 49 d1vjia_ not modelled 26.4 18 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 50 d2c1ha1 not modelled 25.4 10 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) 51 d1ja1a2 not modelled 25.2 13 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Cytochrome p450 reductase N-terminal domain-like 52 d1boba_ not modelled 23.0 8 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 53 c3sggA_ not modelled 21.8 29 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical hydrolase; PDBTitle: crystal structure of a hypothetical hydrolase (bt_2193) from2 bacteroides thetaiotaomicron vpi-5482 at 1.25 a resolution 54 d1icpa_ not modelled 20.7 26 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 55 d1gwja_ not modelled 20.4 23 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 56 c3czpA_ not modelled 20.0 19 PDB header:transferase Chain: A: PDB Molecule:putative polyphosphate kinase 2; PDBTitle: crystal structure of putative polyphosphate kinase 2 from pseudomonas2 aeruginosa pa01 57 c1ydnA_ not modelled 18.3 15 PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. 58 d1irud_ not modelled 17.5 21 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 59 c1ydoC_ not modelled 15.4 16 PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. 60 c3komB_ not modelled 14.5 13 PDB header:transferase Chain: B: PDB Molecule:transketolase; PDBTitle: crystal structure of apo transketolase from francisella tularensis 61 d1l6sa_ not modelled 13.4 9 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) 62 c3l5aA_ not modelled 13.3 20 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus 63 d1uiza_ not modelled 12.0 11 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related 64 d1w5fa2 not modelled 11.9 11 Fold:Bacillus chorismate mutase-like Superfamily:Tubulin C-terminal domain-like Family:Tubulin, C-terminal domain 65 c3mwbA_ not modelled 11.7 18 PDB header:lyase Chain: A: PDB Molecule:prephenate dehydratase; PDBTitle: the crystal structure of prephenate dehydratase in complex with l-phe2 from arthrobacter aurescens to 2.0a 66 c3fwtA_ not modelled 11.5 11 PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: crystal structure of leishmania major mif2 67 d1gzga_ not modelled 10.8 15 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) 68 c2p0wB_ not modelled 10.8 13 PDB header:transferase Chain: B: PDB Molecule:histone acetyltransferase type b catalytic subunit; PDBTitle: human histone acetyltransferase 1 (hat1) 69 d1vh4a_ not modelled 10.6 25 Fold:Single-stranded right-handed beta-helix Superfamily:Stabilizer of iron transporter SufD Family:Stabilizer of iron transporter SufD 70 d2vapa2 not modelled 9.9 4 Fold:Bacillus chorismate mutase-like Superfamily:Tubulin C-terminal domain-like Family:Tubulin, C-terminal domain 71 c2l42A_ not modelled 9.4 19 PDB header:protein binding Chain: A: PDB Molecule:dna-binding protein rap1; PDBTitle: the solution structure of rap1 brct domain from saccharomyces2 cerevisiae 72 c3vcbB_ not modelled 9.2 20 PDB header:viral protein Chain: B: PDB Molecule:rna-directed rna polymerase; PDBTitle: c425s mutant of the c-terminal cytoplasmic domain of non-structural2 protein 4 from mouse hepatitis virus a59 73 d2fcja1 not modelled 9.1 24 Fold:Toprim domain Superfamily:Toprim domain Family:Toprim domain 74 d1q45a_ not modelled 8.8 25 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 75 d1bmlc1 not modelled 8.6 22 Fold:beta-Grasp (ubiquitin-like) Superfamily:Staphylokinase/streptokinase Family:Staphylokinase/streptokinase 76 d1g8fa3 not modelled 8.4 11 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ATP sulfurylase C-terminal domain 77 c3luyA_ not modelled 8.2 7 PDB header:isomerase Chain: A: PDB Molecule:probable chorismate mutase; PDBTitle: putative chorismate mutase from bifidobacterium adolescentis 78 d1xhoa_ not modelled 8.1 45 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:Chorismate mutase 79 c2xczA_ not modelled 8.0 12 PDB header:immune system Chain: A: PDB Molecule:possible atls1-like light-inducible protein; PDBTitle: crystal structure of macrophage migration inhibitory factor2 homologue from prochlorococcus marinus 80 c1xhoB_ not modelled 7.7 42 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:chorismate mutase; PDBTitle: chorismate mutase from clostridium thermocellum cth-682 81 c3lukB_ not modelled 7.4 9 PDB header:rna binding protein Chain: B: PDB Molecule:protein argonaute-2; PDBTitle: crystal structure of mid domain from hago2 82 d1rhya2 not modelled 7.4 20 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Imidazole glycerol phosphate dehydratase 83 d1xg8a_ not modelled 7.4 35 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:YuzD-like 84 c3gzfD_ not modelled 7.2 28 PDB header:viral protein Chain: D: PDB Molecule:replicase polyprotein 1ab; PDBTitle: structure of the c-terminal domain of nsp4 from feline coronavirus 85 c3dmaA_ not modelled 7.1 31 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:exopolyphosphatase-related protein; PDBTitle: crystal structure of an exopolyphosphatase-related protein2 from bacteroides fragilis. northeast structural genomics3 target bfr192 86 c2k19A_ not modelled 7.1 15 PDB header:antimicrobial protein Chain: A: PDB Molecule:putative piscicolin 126 immunity protein; PDBTitle: nmr solution structure of pisi 87 c2qtxL_ not modelled 7.0 86 PDB header:rna binding protein Chain: L: PDB Molecule:uncharacterized protein mj1435; PDBTitle: crystal structure of an hfq-like protein from methanococcus2 jannaschii 88 c3b64A_ not modelled 7.0 9 PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major 89 d2qmwa2 not modelled 7.0 12 Fold:Ferredoxin-like Superfamily:ACT-like Family:Phenylalanine metabolism regulatory domain 90 d1nxha_ not modelled 6.8 24 Fold:Hypothetical protein MTH393 Superfamily:Hypothetical protein MTH393 Family:Hypothetical protein MTH393 91 d2cp8a1 not modelled 6.6 44 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 92 c3cs5B_ not modelled 6.5 28 PDB header:photosynthesis Chain: B: PDB Molecule:phycobilisome degradation protein nbla; PDBTitle: nbla protein from synechococcus elongatus pcc 7942 93 d2dfaa1 not modelled 6.5 11 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:LamB/YcsF-like 94 c2h90A_ not modelled 6.5 26 PDB header:oxidoreductase Chain: A: PDB Molecule:xenobiotic reductase a; PDBTitle: xenobiotic reductase a in complex with coumarin 95 c3eukC_ not modelled 6.3 18 PDB header:cell cycle Chain: C: PDB Molecule:chromosome partition protein mukb, linker; PDBTitle: crystal structure of muke-mukf(residues 292-443)-mukb(head2 domain)-atpgammas complex, asymmetric dimer 96 d2ae8a2 not modelled 6.3 27 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Imidazole glycerol phosphate dehydratase 97 d1vyra_ not modelled 6.3 18 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 98 d1pv8a_ not modelled 6.2 20 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) 99 d1l4zb_ not modelled 6.2 21 Fold:beta-Grasp (ubiquitin-like) Superfamily:Staphylokinase/streptokinase Family:Staphylokinase/streptokinase