Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3l5aA_

Fold library idPDB HeaderMoleculeTitle
c3l5aA_PDB header: oxidoreductaseChain: A: PDB Molecule: nadh/flavin oxidoreductase/nadh oxidase;PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus


Added to library: Tue Dec 28 20:00:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XYRYKPLLQSIHLPNGIKISNRFVLSPXTVNASTKEGYITKADLAYAARRSNSAGXQVTGAAYIEPYGKL
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)

TTGGGGS

TTS
SSS






S
TT



TTTS
SSSGGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence FEYGFNIDHDACIPGLTNXASTXKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPXTLHSPIEHVVIAX
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP) STT

SSGGGTTS


GGG
SSS

SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVXRA
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
TT
S

TTS
TTT



STTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVXDVSNIQYLAIASWGRHIYQNTSRTPG
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)

TT

S
TT
S





TT

GGG
B


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQHADXVGXSSPFVTEPDFVHKLAEQRPHDINLE
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TTTTSBTTSS

SS

SGGG
SST
TTTT
GGG



 .........360.........370.........380.
Sequence FSXADLEDLAIPHAAFKDIVKXXDYGEGLKK
Predicted secondary structure







SS confidence






























Known secondary structure (DSSP)

GGGTTTTT




T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D