Fold library entry viewer: c3komB_

Added to library: Sat Aug 28 22:31:30 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	I	P	R	E	F	S	N	A	I	R	F	L	S	I	D	A	T	L	K	A	K	S	G	H	P	G	X	P	X	G	X	A	D	I	A	T	V	L	W	T	K	F	L	K	H	N	P	N	N	P	H	W	I	N	R	D	R	F	V	L	S	N	G	H	G	S	X	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T		S																			T					T	T		T	T		T	T								S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	S	L	L	H	L	T	G	Y	D	L	S	I	E	D	I	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	Y	G	Y	T	P	G	V	E	T	T	T	G	P	L	G	Q	G	V	A	N	A	V	G	X	A	L	G	E	K	L	L	S	D	R	Y	N	T	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T		S							T	T	T	T		T	T		S	S		S	S			T	T	T	S	T	T			S				S	T	T																						B	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	K	V	I	D	H	H	T	Y	V	F	L	G	D	G	L	X	E	G	V	S	H	E	A	C	S	L	A	G	T	L	G	L	N	K	L	V	A	F	W	D	D	N	N	T	K	G	W	F	S	D	N	T	P	E	R	F	R	A	Y	G	W	H	V	I	E	N	V	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		S															S													T	T		T	T											T	T	T												T	T									T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	D	F	V	A	I	E	K	A	I	N	E	A	H	S	Q	Q	Q	K	P	T	L	I	C	C	K	T	V	I	G	F	G	S	P	E	K	A	G	G	S	P	L	S	D	Q	E	R	A	S	A	A	K	E	L	N	W	D	Y	Q	A	F	E	I	P	Q	D	V	Y	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T														T		S	S	S										T	T	T	T		T	T	T																		T	T					T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	W	D	A	R	E	K	G	Q	A	L	E	A	N	W	Q	G	Q	R	N	L	F	K	D	S	P	K	F	D	E	F	E	R	V	L	S	K	E	L	P	V	G	L	E	S	A	I	N	D	Y	I	A	S	Q	L	S	N	P	V	K	V	A	T	R	K	A	S	Q	X	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					G	G	G	S	T	T										T				T	T															S				B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	V	L	C	K	N	X	P	E	X	F	G	G	S	A	D	L	T	S	N	N	T	N	W	S	G	S	V	W	L	N	N	T	Q	E	G	A	N	Y	L	S	Y	G	V	R	E	F	G	X	A	A	I	X	N	G	L	S	L	Y	G	G	I	K	P	Y	G	G	T	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T							S									T	T			B	T	T	T		S	T	T								S																S	S									G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	F	S	D	Y	S	R	N	A	I	R	X	S	A	L	X	K	Q	P	V	V	H	V	X	S	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	I	E	H	V	P	S	L	R	L	I	P	N	L	S	V	W	R	P	A	D	T	I	E	T	X	I	A	W	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G														T	T											S	G	G	G		T	T		T	T	T			S	S							T	S	T	T								S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	V	K	S	K	D	T	P	S	V	X	V	L	T	R	Q	N	L	X	P	V	V	Q	T	Q	H	Q	V	A	N	I	A	R	G	G	Y	L	V	K	D	N	P	D	A	K	L	T	I	V	A	T	G	S	E	V	E	L	A	V	K	V	A	N	E	F	E	K	K	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S									S	S		B														T	T	T								T	T									T	T															T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	L	N	V	A	S	I	P	C	V	E	V	F	A	T	Q	A	H	E	Y	K	K	T	V	I	K	D	D	I	P	A	V	F	V	E	X	A	Q	P	D	X	W	Y	K	Y	X	P	K	A	G	G	E	V	K	G	I	Y	S	F	G	E	S	A	P	A	E	D	L	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S							T	S									T	T	T	T	S							S	S			G	G	G	G	G	G			T	T									S				S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Sequence	R	F	G	F	T	V	E	N	I	S	N	I	V	A	K	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T		S									T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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