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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2l42A_

Fold library idPDB HeaderMoleculeTitle
c2l42A_PDB header: protein bindingChain: A: PDB Molecule: dna-binding protein rap1;PDBTitle: the solution structure of rap1 brct domain from saccharomyces2 cerevisiae


Added to library: Sat Jan 29 08:32:56 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EKKEQVSGPPLSNMKFYLNRDADAHDSLNDIDQLARLIRANGGEVLDSKPRESKENVFIVSPYNHTNLPT
Predicted secondary structure







































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Known secondary structure (DSSP)

SSS
SS
SS



B

SSS
SS
SSTTTTS







SS



B
TT


SSSB
 .........80.........90.......
Sequence VTPTYIKACCQSNSLLNMENYLVPYDN
Predicted secondary structure















SS confidence


























Known secondary structure (DSSP)

TTSTTS
GGGG

B
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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