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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2l42A_ | PDB header: protein binding | Chain: A: PDB Molecule: dna-binding protein rap1; | PDBTitle: the solution structure of rap1 brct domain from saccharomyces2 cerevisiae |
Added to library: Sat Jan 29 08:32:56 2011 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | E | K | K | E | Q | V | S | G | P | P | L | S | N | M | K | F | Y | L | N | R | D | A | D | A | H | D | S | L | N | D | I | D | Q | L | A | R | L | I | R | A | N | G | G | E | V | L | D | S | K | P | R | E | S | K | E | N | V | F | I | V | S | P | Y | N | H | T | N | L | P | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | B | ![]() | ![]() | S | S | S | S | S | S | S | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | ![]() | ![]() | S | S | B | T | T | S | S | S | B |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Sequence | V | T | P | T | Y | I | K | A | C | C | Q | S | N | S | L | L | N | M | E | N | Y | L | V | P | Y | D | N | |||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | S | G | G | G | G | B | S |
Download: | PDB structure | FASTA sequence |
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