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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2020 Sep 19

Fold library idPDB HeaderMoleculeTitle
c6kxhD_ 1.78 hydrolase Chain: D: putative hydrolase;
c6kxuG_ 2.83 lipid binding protein Chain: G: protein bonzai 1;
c7c6xK_ 2.65 sugar binding protein Chain: K: sugar abc transporter, periplasmic sugar-binding protein;
c6tc9C_ 2.18 dna binding protein Chain: C: formamidopyrimidine-dna glycosylase;
c6k9fE_ 3.70 signaling protein Chain: E: caspase recruitment domain-containing protein 8;
c6uabB_ 2.10 peptide binding protein/inhibitor Chain: B: modified unnatural bim bh3 peptide;
c7cr0A_ 3.10 transport protein Chain: A: potassium voltage-gated channel subfamily kqt member 2;
c6trcM_ 2.98 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c6yhsa_ 2.70 ribosome Chain: A: 50s ribosomal protein l2;
c6wu1A_ 3.09 membrane protein Chain: A: dass family sodium-coupled anion symporter;
c6traK_ 2.85 photosynthesis Chain: K: photosystem i reaction center subunit psak;
c6xfjA_ 1.20 protein transport Chain: A: type 3 secretion system pilotin;
c6trcm_ 2.98 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c6z9lA_ 3.06 cell adhesion Chain: A: prga;
c6trdz_ 3.16 photosynthesis Chain: Z:
c7jm1B_ 2.31 transferase Chain: B: aminocyclitol acetyltransferase apma;
c6wcxD_ 2.89 hydrolase Chain: D: esterase family protein;
c6liyB_ 1.76 lyase Chain: B: chromophore lyase crl, chloroplastic;
c6xj9A_ 2.00 hydrolase Chain: A: agarase;
c6ysiW_ 2.50 ribosome Chain: W: 50s ribosomal protein l31;
c6trcx_ 2.98 photosynthesis Chain: X: photosystem i 4.8k protein;
c7cr4D_ 3.90 transport protein Chain: D: potassium voltage-gated channel subfamily kqt member 2;
c6m3dC_ 1.60 dna binding protein/dna Chain: C: segmentation polarity homeobox protein engrailed,
c6ysiE_ 2.50 ribosome Chain: E: 50s ribosomal protein l6;
c7jh4D_ 2.00 oxidoreductase Chain: D: nad(p)h-dependent oxidoreductase;
c7jw1C_ 4.19 virus Chain: C: capsid proteins;
c6yp6A_ 0.97 sugar binding protein Chain: A: nans-p;
c6ybwy_ 3.10 translation Chain: Y:
c6yt9i_ 2.70 ribosome Chain: I:
c6ybvs_ 3.80 translation Chain: S:
c6l3aB_ 3.00 oxidoreductase Chain: B: cytochrome p450;
c6l85A_ 2.30 membrane protein Chain: A: phosphate transporter;
c6vilC_ 3.30 structural protein Chain: C: bah and coiled-coil domain-containing protein 1;
c6ysiP_ 2.50 ribosome Chain: P: 50s ribosomal protein l23;
c6yhsR_ 2.70 ribosome Chain: R: 50s ribosomal protein l25;
c6ybw9_ 3.10 translation Chain: 9: 60s ribosomal protein l41;
c6w64A_ 3.90 hydrolase/dna/rna Chain: A: cas12i;
c6wvgB_ 2.90 membrane protein Chain: B: green fluorescent protein, leukocyte surface antigen cd53
c6yj6A_ 3.10 transcription Chain: A: transcription factor tau 131 kda subunit;
c6kxkD_ 2.50 lipid binding protein Chain: D: protein bonzai 1;
c7jw1b_ 4.19 virus Chain: B: capsid proteins;
c6ysiB_ 2.50 ribosome Chain: B: 50s ribosomal protein l3;
c6trcy_ 2.98 photosynthesis Chain: Y:
c6zgqA_ 1.90 splicing Chain: A: acel nrdhf-1-1 intein;
c6ybvt_ 3.80 translation Chain: T:
c6x0nP_ 10.00 gene regulation Chain: P: poly [adp-ribose] polymerase 2;
c6unwA_ 2.21 hydrolase Chain: A: soluble epoxide hydrolase;
c6ybtu_ 6.00 translation Chain: U:
c6yt9g_ 2.70 ribosome Chain: G:
c6x0mo_ 6.30 gene regulation Chain: O: histone parylation factor 1;
c6ypuu_ 2.90 ribosome Chain: U:
c6trdy_ 3.16 photosynthesis Chain: Y:
c7c00A_ 1.70 immune system Chain: A: scavenger receptor class a member 5;
c6uzvM_ 3.10 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c7jw1e_ 4.19 virus Chain: E: glycoprotein 3;
c6ybwz_ 3.10 translation Chain: Z:
c7cjrA_ 2.28 signaling protein Chain: A: histidine kinase;
c6ygjI_ 2.07 structural protein Chain: I: carbohydrate-responsive element-binding protein;
c6ygjB_ 2.07 structural protein Chain: B: carbohydrate-responsive element-binding protein;
c6m4kA_ 1.30 hydrolase Chain: A: alpha-amylase;
c6traX_ 2.85 photosynthesis Chain: X: photosystem i 4.8k protein;
c6w5cA_ 2.90 hydrolase/dna/rna Chain: A: cas12i;
c6uzvm_ 3.10 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c6tl1B_ 2.03 gene regulation Chain: B: protein tasor;
c6vzfA_ 2.03 structural protein Chain: A: autophagy-related protein 11;
c6trdx_ 3.16 photosynthesis Chain: X: photosystem i 4.8k protein;
c6ysiH_ 2.50 ribosome Chain: H: 50s ribosomal protein l15;
c6yhsQ_ 2.70 ribosome Chain: Q: 50s ribosomal protein l24;
c6susA_ 1.76 toxin Chain: A: bifunctional hemolysin/adenylate cyclase;
c6ybsx_ 3.10 translation Chain: X: 40s ribosomal protein s17;
c6trcX_ 2.98 photosynthesis Chain: X: photosystem i 4.8k protein;
c6traM_ 2.85 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c6uzv9_ 3.10 photosynthesis Chain: 9: photosystem i reaction center subunit xii;
c6trdm_ 3.16 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c6x6oB_ 1.52 viral protein Chain: B: protein spackle;
c6ysiL_ 2.50 ribosome Chain: L: 50s ribosomal protein l19;
c6z8fA_ 2.80 virus like particle Chain: A: capsid protein precursor;
c6ysiU_ 2.50 ribosome Chain: U: 50s ribosomal protein l29;
c6xz5A_ 2.30 dna binding protein Chain: A: uncharacterized protein,rovc,uncharacterized protein;
c6ybd5_ 3.30 translation Chain: 5: eukaryotic translation initiation factor 3 subunit l;
c6z0hA_ UNK membrane protein Chain: A: triggering receptor expressed on myeloid cells 2;
c7a5rB_ 3.70 viral protein Chain: B: spike glycoprotein;
c6trdM_ 3.16 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c6ublB_ 1.50 unknown function Chain: B: dynf;
c6yj6C_ 3.10 transcription Chain: C: transcription factor tau 55 kda subunit;
c6y56A_ 1.23 toxin Chain: A: uncharacterized protein;
c6uhsA_ 2.46 metal transport Chain: A: ryanodine receptor 1 chimera;
c6ybdx_ 3.30 translation Chain: X:
c6z0gA_ UNK membrane protein Chain: A: triggering receptor expressed on myeloid cells 2;
c6yj6B_ 3.10 transcription Chain: B: transcription factor tau 95 kda subunit,transcription
c6trcz_ 2.98 photosynthesis Chain: Z:
c6trdX_ 3.16 photosynthesis Chain: X: photosystem i 4.8k protein;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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