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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6yj6B_

Fold library idPDB HeaderMoleculeTitle
c6yj6B_3.10PDB header: transcriptionChain: B: PDB Molecule: transcription factor tau 95 kda subunit,transcription


Added to library: Sat Sep 19 08:45:38 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IADEFTLDLPRIPSLELPLNVSTKHSSIQKAIKMCGGIEKVKEAFKEHGPIESQHGLQLYLNDDTDSDGS
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SS


SSTT
S

SSBTTB


TT

B
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KSYFNEHPVIGKRVPFRDESVILKVTMPKGTLSKNNNSVKDSIKSLKDSNKLRVTPVSIVDNTIKFREMS
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Known secondary structure (DSSP) BTTS




SS




TTTTGGGTT
TTT
S



S

 .........150.........160.........170.........180.........190.........200.........210
Sequence DFQIKLDNVPSAREFKSSFGSLEWNNFKSFVNSVPDNDSQPQENIGNLILDRSVKIPSTDFQLPPPPKLS
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Known secondary structure (DSSP)





SS
TTTTT

TTS
SS
S
TTS
GGGS



SS


TT
TT



S


 .........220.........230.........240.........250.........260.........270.........280
Sequence MVTYIKNYQLFVHDLSDKTVIPSQAHEQVLYDFEVAKKTKVYPGTKSDSKFYESLEECLKILRELFARRP
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SS




S

STT
SSS
GGG

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IWVKRHLDGIVPKKIHHTMKIALALISYRFTMGPWRNTYIKFGIDPRSSVEYAQYQTEYFKIERKLLSSP
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Known secondary structure (DSSP)
TTTS
STTSTTTTTTSSSTTBT
TT

GGG
GGGSTT



TTTS
ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence IVKKNVPKPPPLVFESDTPGGIDSRFKFDGKRIPWYLMLQIDLLIGEPNIAEVFHNVEYLDKANELTGWF
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Known secondary structure (DSSP) TS




SS


SSTTS

SSSS
SSSS

S


TTSTT



SS
BTTTBTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence KELDLVKIRRIVKYELGCMVQGNYEYNKYKLKYFKTMLFGAITEEPDDAALENEEMDTDQNLKVPAXXXX
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Known secondary structure (DSSP)
TT




T





S


S



TT
 .........500........
Sequence XXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

SST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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