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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6w64A_

Fold library idPDB HeaderMoleculeTitle
c6w64A_3.90PDB header: hydrolase/dna/rnaChain: A: PDB Molecule: cas12i;


Added to library: Sat Sep 19 08:43:55 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASETRKAYTTKMIPRSHDRMKLLGNFMDYLMDGTPIFFELWNQFGGGIDRDIISGTANKDKISDDLLLAV
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T

TTTSTTT


SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence NWFKVMPINSKPQGVSPSNLANLFQQYSGSEPDIQAQEYFASNFDTEKHQWKDMRVEYERLLAELQLSRS
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Known secondary structure (DSSP)
SSSTT



STTTTT



S
B

TTT
SST

 .........150.........160.........170.........180.........190.........200.........210
Sequence DMHHDLKLMYKEKCIGLSLSTAHYITSVMCMEKIKAFLASKVGPYYLGSYSAMLENALSPIKGMTTKNCK
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Known secondary structure (DSSP) TT
SSSS




S
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence FVLKQIDAKNDIKYENEPFGKIVEGVKWVLHPHHIGESNIKTLWEDLNAIHSKYEEDIASLSEDKKEKRI
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Known secondary structure (DSSP) TS

TT






GGGTTTTSS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence KVYQGDVCQTINTYCEEVGKEAKTPLVQLLRYLYSRKDDIAVDKIIDGITFLSKKHKVEKQKINPVIQKY
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Known secondary structure (DSSP) TTTS



T
SSS
T
B







 .........360.........370.........380.........390.........400.........410.........420
Sequence PSFNFGNNSKLLGKIISPKDKLKHNLKCNRNQVDNYIWIEIKVLNTKTMRWEKHHYALSSTRFLEEVYYP
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Known secondary structure (DSSP)


SSSS

TT

S

S
TTTT

TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence ATSYEGKPALSAEQIEQIRSAPVGLRKVKKRQMRLEAARQQNLLPRYTWGKDFNINICKRGNNFEVTLAT
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S
TTTTT
S





S


BSSS
B



 .........500.........510.........520.........530.........540.........550.........560
Sequence KVKKKKEKNYKVVLGYDANIVRKNTYAAIEAHANGDGVIDYNDLPVKPIESGFVTVESQVRDKSYDQLSY
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SSS

SS

SS

SSSS




SS
TTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence NGVKLLYCKPHVESRRSFLEKYNMKDFEAIADDETSLYYFNMKYCKLLQSSIRNHSSQAKEYREEIFELL
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Known secondary structure (DSSP)



SSS
T




TTS
TGGG
GGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence RDGKLSVLKLSSLSNLSFVMFKVAKSLIGTYFGHLLKKAPPITDEDKQKADPEMFALRLALEEKRLNKVK
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Known secondary structure (DSSP) TSSSSSTTTS

SST







 .........710.........720.........730.........740.........750.........760.........770
Sequence SKKEVIANKIVAKALELRDKYGPVLIKGENISDTTKKGKKSSTNSFLMDWLARGVANKVKEMVMMHQGLE
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Known secondary structure (DSSP) TS





S
S
SSS
TT
TTSSS
B
 .........780.........790.........800.........810.........820.........830.........840
Sequence FVEVNPNFTSHQDPFVHKNPENTFRARYSRCTPSELTEKNRKEILSFLSDKPSKRPTNAYYNEGAMAFLA
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Known secondary structure (DSSP)



TTTTT

TTTTTSSS




BB

B
GGG

S



S
 .........850.........860.........870.........880.........890.........900.........910
Sequence TYGLKKNDVLGVSLEKFKQIMANILHQRSEDQLLFPSRGGMFYLATYKLDADATSVNWNGKQFWVCNADL
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Known secondary structure (DSSP) T

S
S
TT
S
B

B
TT


BSS

SSS

SSSS


 .........920........
Sequence VAAYNVGLVDIQKDFKKK
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Known secondary structure (DSSP) TTTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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